Pairwise Alignments

Query, 473 a.a., Group II intron-encoding maturase from Pseudomonas putida KT2440

Subject, 618 a.a., Retron-type RNA-directed DNA polymerase (EC 2.7.7.49) from Sphingobium sp. HT1-2

 Score =  146 bits (368), Expect = 2e-39
 Identities = 81/204 (39%), Positives = 123/204 (60%), Gaps = 2/204 (0%)

Query: 67  RAYQRVVSNKGAPGADGITVADLAGYVKQYWPTLKARLLAGEYHPQAVRAVEIPKPQGGT 126
           +AY  + SNKGA    G+T   L G+  +    L AR+ AG+Y    VR V IPK  G  
Sbjct: 38  KAYAEMASNKGAL-TRGVTNNTLDGFSFERVENLIARISAGDYRFTPVRRVYIPKANGKK 96

Query: 127 RQLGIPSVVDRLIQQALQQQLTPIFDPLFSDYSYGFRPGRSTHQAIEMARAHVTAGHRWC 186
           R LG+P+  D+L+Q  ++  L  +++P+FS +S+GFR GRS H A++  +   T G +W 
Sbjct: 97  RPLGVPTADDKLVQGVVKLLLEVVYEPVFSVHSHGFRRGRSCHTALDKIKNGWT-GVKWF 155

Query: 187 VEIDLEKFFDRVNHDILMACIERRVKDKCVLRLIRRYLEAGIMSGGVVSPRQEGTPQGGP 246
           V++D+  FFD ++H IL+  +++R+ DK  ++++   L+AG M          GTPQGG 
Sbjct: 156 VDVDVVGFFDNIDHRILLNLLKKRIDDKRFIKVVEGMLKAGYMEEWKFHATMSGTPQGGI 215

Query: 247 LSPLLSNILLDELDRELERRGHRF 270
           +SP+L+NI L ELD  LE+   RF
Sbjct: 216 VSPILANIYLHELDEFLEQEKARF 239