Pairwise Alignments

Query, 473 a.a., Group II intron-encoding maturase from Pseudomonas putida KT2440

Subject, 626 a.a., RNA-directed DNA polymerase from Dickeya dianthicola ME23

 Score =  131 bits (330), Expect = 6e-35
 Identities = 73/206 (35%), Positives = 120/206 (58%), Gaps = 10/206 (4%)

Query: 67  RAYQRVVSNKGA--PGADGITVADLAGYVKQYWPTLKARLLAGEYHPQAVRAVEIPK--- 121
           +AY  + SN GA   G +  T+ +++        +L   + +G Y P+  R   IPK   
Sbjct: 39  QAYANIYSNSGAITRGINNNTMDEMS---VDRIISLIHLIDSGSYIPKPCRRTHIPKDAR 95

Query: 122 -PQGGTRQLGIPSVVDRLIQQALQQQLTPIFDPLFSDYSYGFRPGRSTHQAIEMARAHVT 180
            P G  R LGIP+  D+L Q+ ++  L  I++P+FSD+SYGFRP RS H A++  R +  
Sbjct: 96  KPNGKKRPLGIPTGDDKLTQEVMRMLLEEIYEPVFSDWSYGFRPKRSCHSALKEIR-NGW 154

Query: 181 AGHRWCVEIDLEKFFDRVNHDILMACIERRVKDKCVLRLIRRYLEAGIMSGGVVSPRQEG 240
            G +W  ++D++ +FD ++HD+L+  + +R+ D   L L+++ L+AG +          G
Sbjct: 155 KGTKWVCDVDIKGYFDNIDHDLLLKFLSKRIADNKFLALLKKLLKAGYLDNWRYFGTHSG 214

Query: 241 TPQGGPLSPLLSNILLDELDRELERR 266
           TPQGG +SP+L+N+ L ELD  ++ R
Sbjct: 215 TPQGGIISPILANVFLHELDEFMKNR 240



 Score = 35.0 bits (79), Expect = 7e-06
 Identities = 34/132 (25%), Positives = 66/132 (50%), Gaps = 9/132 (6%)

Query: 251 LSNILLDELDRELERRGHRFVRYADDANI-YVRSPRAGERVLVSVERFLRERLKLTVNRK 309
           LS++++D  D E +R   R+VRYADD  I  + S    ++++  V  F+   L L ++++
Sbjct: 303 LSSVIMD--DTEFKRM--RYVRYADDFLIGVIGSKGEAKKIMEEVVDFVESELHLEISKE 358

Query: 310 KSQVARAWK-CDYLGYGMSWHQQPRLRVARMSLDRLRDRLRMLLRSVRAR-KMATVIERI 367
           KS +    K   +LGY +   ++ +     + L+    +   + R++     +    ERI
Sbjct: 359 KSGIIDPKKGFTFLGYEIKTRRERKQVKCVVGLNTDGSKTHAVKRTITEHVHLGVPRERI 418

Query: 368 NPV--LRGWASY 377
             +  LRG+ +Y
Sbjct: 419 LKLCSLRGYGNY 430