Pairwise Alignments

Query, 473 a.a., Group II intron-encoding maturase from Pseudomonas putida KT2440

Subject, 398 a.a., Retron-type reverse transcriptase from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  148 bits (373), Expect = 4e-40
 Identities = 107/372 (28%), Positives = 186/372 (50%), Gaps = 29/372 (7%)

Query: 71  RVVSNKGAPGADGITVADLAGYVKQYWPTLKARLLAGEYHPQAVRAVEIPKPQGGTRQLG 130
           R ++   + G DG +       +    P L   + +GEY    +R V IPK + G R LG
Sbjct: 31  RQLNKTSSVGVDGESWNAYGLRLPDRLPELLRTVKSGEYKAPQIRRVYIPKGKTGKRPLG 90

Query: 131 IPSVVDRLIQQALQQQLTPIFDPLFSDYSYGFRPGRSTHQAIEMARAHVTAGH-RWCVEI 189
           IP++ D+++Q +++  L PI++  F ++SYGFRP RS H AIE     V+ G  R+ ++ 
Sbjct: 91  IPTIEDKVLQPSVRSVLEPIYEEDFKEFSYGFRPNRSCHHAIEYMFEKVSYGRMRYIIDA 150

Query: 190 DLEKFFDRVNHDILMACIERRVKDKCVLRLIRRYLEAGIMSGGVVSPRQEGTPQGGPLSP 249
           D++ +F  ++H +L   ++RRVKD  V +++ ++L+AGI+    +   + GTPQGG +SP
Sbjct: 151 DIQDYFGSIDHGLLRVFLDRRVKDGVVRKMLDKWLKAGILEDKQLHYPKGGTPQGGIVSP 210

Query: 250 LLSNILL---------DELDRELERRGHRFVRYADDANIYVRSPRAGERVLVSVE-RFLR 299
           +LSNI L         D++   L  +    VRYADD  +        +RV+  ++ RF +
Sbjct: 211 ILSNIYLHYVLDEWFSDKIQPLLTGKSF-MVRYADDFVMGFEKGEDAKRVMAVLDKRFTK 269

Query: 300 ERLKLTVNRKK-----SQVARAWKCDYLGYGMSWHQQPRLRVARMSLDRLRDRLRML--- 351
             L+L   + K     + +      D+LG+    H   + R  R+ L R     +++   
Sbjct: 270 YGLRLHPEKTKVIDLNTNIRGERSFDFLGFA---HYMGKTRKGRLVLKRKTSSKKLVMAI 326

Query: 352 ------LRSVRARKMATVIERINPVLRGWASYFKLSQSKRPLEELDGWVRHKLRCVIWRQ 405
                 ++  R RK+  +I  +N  LRG  +Y+ ++ + R L +    V   L   + R+
Sbjct: 327 TKTGDWIKGNRHRKLKELICDLNVRLRGHYAYYGVTFNVRSLNKYHRCVERLLHKWLNRR 386

Query: 406 WKQPPTRLRNLM 417
               P  L  ++
Sbjct: 387 GGNEPLYLEKIV 398