Pairwise Alignments

Query, 473 a.a., Group II intron-encoding maturase from Pseudomonas putida KT2440

Subject, 431 a.a., Group II intron-encoded protein LtrA from Alteromonas macleodii MIT1002

 Score =  161 bits (408), Expect = 4e-44
 Identities = 120/373 (32%), Positives = 188/373 (50%), Gaps = 40/373 (10%)

Query: 65  LRRAYQRVVSNKGAPGADGITVADLAGYVKQYWPTLKARLLAGEYHPQAVRAVEIPKPQG 124
           L  AY R+    GA G DG T  D   ++     +L  R+ +G Y   A+R V IPK  G
Sbjct: 34  LYEAY-RLTRKDGAVGIDGETARDYEQHLDANLQSLLERVKSGRYRAPAIRRVYIPKGDG 92

Query: 125 GTRQLGIPSVVDRLIQQALQQQLTPIFDPLFSDYSYGFRPGRSTHQAIEMARAHV-TAGH 183
             R LGIP+  D+L+Q+A+   L P+++  F D S+GFRPG S HQA++  R H+   G 
Sbjct: 93  KLRPLGIPTFEDKLVQRAVVMLLEPVYEQTFYDCSFGFRPGYSAHQALQSLRNHIMDDGG 152

Query: 184 RWCVEIDLEKFFDRVNHDILMACIERRVKDKCVLRLIRRYLEAGIMSGGVVSPRQEGTPQ 243
           +W +++D++++FD + H  L   +++RV D  + ++I ++L+AG+M G  +     GTPQ
Sbjct: 153 KWVLDVDIQQYFDTIEHTQLRNFLDQRVTDGVIRKMIDKWLKAGVMDGSKLKKSVIGTPQ 212

Query: 244 GGPLSPLLSNI----LLDE------LDRELERRGHRFVRYADDANIYVRSPRAGERV-LV 292
           GG +SPLL+NI    +LDE        R L R      R+ADD  +         RV  V
Sbjct: 213 GGVISPLLANIYLHYVLDEWFANSVKPRMLGRSS--LTRFADDFVMVFEHYEDCYRVQQV 270

Query: 293 SVERFLRERLKLTVNR----------KKSQVARAWKC---DYLGYGMSWHQQPR------ 333
             +RF R  L L  ++          +K+ V R  KC   D+LG+   W +  R      
Sbjct: 271 LTKRFTRYGLTLHPDKTRRVDFRFRYRKTNVQRG-KCVNFDFLGFTHYWGRSRRGHFVVC 329

Query: 334 LRVARMSLDRLRDRLRMLLRSVRARKMATVIERINPVLRGWASYFKLSQSKRPLEELDGW 393
            + A+  L R      +L + +R + +    E +N  L G   YF ++ + + L+ L   
Sbjct: 330 QKTAKNRLARTLKAFNVLCQKMRHKPLDLQWEWLNRRLVGHYVYFGITGNGKSLKRL--- 386

Query: 394 VRHKLRCVIWRQW 406
             HK+   +W +W
Sbjct: 387 -HHKVE-RLWHKW 397