Pairwise Alignments

Query, 136 a.a., Fimbrial protein from Pseudomonas putida KT2440

Subject, 146 a.a., predicted major pilin subunit (NCBI) from Escherichia coli BW25113

 Score = 48.9 bits (115), Expect = 3e-11
 Identities = 39/135 (28%), Positives = 56/135 (41%), Gaps = 10/135 (7%)

Query: 1   MKGQRGITLIELMIVVAIIGILATIALPMYTNHQARSKAAAGLLEISALKTAMDLRL--N 58
           M  QRG TLIELM+V+ II IL+ I +P Y N+  ++     L      +TA++L    +
Sbjct: 1   MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVELCALEH 60

Query: 59  DGKDVADVAALGGQPATAHCAITASGKAADGSGSIVCTLVDAPANALGKALT----LTRS 114
            G D  D    GG         T    A   +  +V        N L   +T        
Sbjct: 61  GGLDTCD----GGSNGIPSPTTTRYVSAMSVAKGVVSLTGQESLNGLSVVMTPGWDNANG 116

Query: 115 TSGWACTTDIEDDLA 129
            +GW    +I+ D A
Sbjct: 117 VTGWTRNCNIQSDSA 131