Pairwise Alignments

Query, 402 a.a., Type 4 fimbrial assembly protein PilC from Pseudomonas putida KT2440

Subject, 402 a.a., Putative type II secretion system protein F from Xanthobacter sp. DMC5

 Score =  172 bits (435), Expect = 2e-47
 Identities = 122/394 (30%), Positives = 197/394 (50%), Gaps = 13/394 (3%)

Query: 17  GAPVSGQTPGRSPAYVRAGLIRQGITVASLRP-------ASGLAFSLPKRREKADPAGFS 69
           G  VSG+    + A VR  +   G+      P       A G +F  PK     D   F+
Sbjct: 13  GQIVSGEIAAPTEAEVRRRIEFLGLVPVETTPLKEKKDNAFGFSFGAPKAE---DVTLFT 69

Query: 70  RQLATLLKAGVPLLQAFEVMGRSGCDAAQAALLERLKQDVASGLGLADALQRHPAWFDAL 129
           R LA LL+AG  L +A E++          A+  +++ DV +G  LA+AL  HPA F  +
Sbjct: 70  RDLALLLRAGARLDEALELLTGDTDLGRMRAVARKIRADVLAGESLAEALASHPALFPPV 129

Query: 130 YCNLVRVGEQSGTLDRQLEQLAGMLEQRRVLHKKVRKAMIYPLLLLLTGLGVSAILLLEV 189
           Y  LVRVGE SGT+DR LE +A   ++   L +KV  A+ YP  +L+   GV    L+ V
Sbjct: 130 YVALVRVGEASGTVDRMLELVAAERQRAEELRRKVVSALQYPAFVLVAAGGVLVFFLMFV 189

Query: 190 IPKFESMFSGMGAALPAFTQWVINLSTGLSRFAPLLLVMGVVM-GVAVRQLYRQHAPARL 248
           +P+F S+   MGA L    Q +++LS GL   A  + +  VV+  +A   L RQ    R 
Sbjct: 190 MPQFSSVLRDMGAKLDPMVQVLLDLSDGLQAHAAAVGIAAVVLPALAFLALRRQE--VRG 247

Query: 249 WISRRVLGLPVFGKLLGQAALARFARSLATSYGAGVPLLDALGTVARVTGGDLHEQAVLR 308
            ++  +  LP+   +L     A F R+L+   G GV L  AL  +  V           +
Sbjct: 248 VVTGALSKLPLVRTVLLFRRSAVFCRNLSILLGNGVTLTAALRIIVDVMAAGEEASVWAK 307

Query: 309 LRQGMANGQGLNQAMAGEPLFPPLLVQLTAIGESSGTLDQMLEKAASHYEEQVSQALDQL 368
               + +G  L+ A A   + PP+ +++  +GE +G L  +  + A  YEE++ +AL ++
Sbjct: 308 AADRVRHGGRLSDAFAEGDVLPPMAIRMLRLGEETGQLALLSGRIADFYEEKLQRALARV 367

Query: 369 TSLLEPAIVLILGLLVGGLVVAMYLPIFQLGSLI 402
            +++ PA ++ + ++VGGL+V++   +  +   I
Sbjct: 368 VAVIGPAAIVTISVVVGGLIVSVMTALLSVSQSI 401