Pairwise Alignments

Query, 402 a.a., Type 4 fimbrial assembly protein PilC from Pseudomonas putida KT2440

Subject, 409 a.a., Type IV fimbrial assembly protein PilC from Variovorax sp. SCN45

 Score =  284 bits (726), Expect = 4e-81
 Identities = 152/405 (37%), Positives = 252/405 (62%), Gaps = 11/405 (2%)

Query: 2   TSSSLLYHWHGTDANGAPVSGQTPGRSPAYVRAGLIRQGITVASL---RPASGLAFSLPK 58
           T    ++ W G D NG  V G+        V+A L RQG+  + +   R  SG      K
Sbjct: 12  THKEFVFEWEGKDRNGKLVRGELRAAGENQVQAALRRQGVLASKIKKRRMRSG------K 65

Query: 59  RREKADPAGFSRQLATLLKAGVPLLQAFEVMGRSGCDAAQAALLERLKQDVASGLGLADA 118
           + +  D A F+RQLAT++KAGVPL+Q+F+++GR   +A+ A LL  ++ DV +G  L+ A
Sbjct: 66  KIKPKDIAIFTRQLATMMKAGVPLMQSFDIVGRGNANASVAKLLNDIRSDVETGTSLSMA 125

Query: 119 LQRHPAWFDALYCNLVRVGEQSGTLDRQLEQLAGMLEQRRVLHKKVRKAMIYPLLLLLTG 178
            ++ P +FD LYCNLV  GE +G L+  L++LA  +E+   +  K++ A++YP  +++  
Sbjct: 126 FRKFPKYFDNLYCNLVEAGEAAGILEELLDRLATYMEKTEAIKSKIKSALMYPTSVIVVA 185

Query: 179 LGVSAILLLEVIPKFESMFSGMGAALPAFTQWVINLSTGLSRFAPLLLVMGVVMGVAV-R 237
             V AI+++ VIP F+ +F+  GA LPA T +V+ +S     +   L+  G+  G+    
Sbjct: 186 FVVVAIIMIFVIPAFKQVFTSFGADLPAPTLFVMAISEFFVSYW-WLIFGGLGGGIYFFL 244

Query: 238 QLYRQHAPARLWISRRVLGLPVFGKLLGQAALARFARSLATSYGAGVPLLDALGTVARVT 297
           Q ++++   +  + R +L +P+FG L+ ++ +AR+ R+LAT + AG+PL++AL +V   +
Sbjct: 245 QAWKRNERVQRVMDRALLRVPIFGVLIEKSCVARWTRTLATMFAAGIPLVEALDSVGGAS 304

Query: 298 GGDLHEQAVLRLRQGMANGQGLNQAMAGEPLFPPLLVQLTAIGESSGTLDQMLEKAASHY 357
           G  ++  A  +++Q ++ G  L  AM    LFP +++Q+TAIGE SG++D ML KAA  Y
Sbjct: 305 GNTVYGDATAKIQQEVSTGTSLTAAMTNVNLFPSMVIQMTAIGEESGSIDHMLGKAADFY 364

Query: 358 EEQVSQALDQLTSLLEPAIVLILGLLVGGLVVAMYLPIFQLGSLI 402
           E +V   +  L+SL+EP I++ LG ++GG+VV+MYLPIF+LG ++
Sbjct: 365 ESEVDDMVAGLSSLMEPIIIVFLGTIIGGIVVSMYLPIFKLGQVV 409