Pairwise Alignments

Query, 402 a.a., Type 4 fimbrial assembly protein PilC from Pseudomonas putida KT2440

Subject, 403 a.a., Type II secretion pathway protein XcpS from Pseudomonas putida KT2440

 Score =  206 bits (523), Expect = 1e-57
 Identities = 132/366 (36%), Positives = 202/366 (55%), Gaps = 5/366 (1%)

Query: 39  QGITVASLRPASGLAFSLPKRREKA-DPAGFSRQLATLLKAGVPLLQAFEVMGRSGCDAA 97
           QG+ V SLR + G    +  RRE A D   FS++L+TLL AG+PL+ A E +      A 
Sbjct: 40  QGLRVLSLRSSGGALRGMAWRREAAFDLVLFSQELSTLLNAGLPLIDALESLAEKSPAAT 99

Query: 98  QAALLERLKQDVASGLGLADALQRHPAWFDALYCNLVRVGEQSGTLDRQLEQLAGMLEQR 157
              +L  L + +  G  L+ AL + P  F  LY  LV+  E++G L   L +     ++ 
Sbjct: 100 ARKVLAELVRQLYEGRSLSQALGQQPRVFPPLYVALVQSSERTGALGDALTRYISYRQRL 159

Query: 158 RVLHKKVRKAMIYPLLLLLTGLGVSAILLLEVIPKFESMFSGMGAALPAFTQWVINLSTG 217
            ++ +K+  A +YPLLLLL G GV   LL  V+P+F  +F GMG  LP  ++ ++ +   
Sbjct: 160 DLVRQKLVGASVYPLLLLLVGGGVVLFLLGYVVPRFSQVFEGMGTELPWLSRVLMQVGLF 219

Query: 218 L-SRFAPLLLVMGVVMGVAVRQLYRQHAPARLWISRRVLGLPVFGKLLGQAALARFARSL 276
           L ++ APL L  G V GVA   L R+H   R W S ++  LP   + L    LARF RSL
Sbjct: 220 LHAQQAPLAL--GTVGGVAALWLLRRHPRVRYWASCQLRRLPALHQRLMMYELARFYRSL 277

Query: 277 ATSYGAGVPLLDALGTVARVTGGDLHEQAVLRLRQGMANGQGLNQAMAGEPLFPPLLVQL 336
                 G+P+L A+G +AR   G+   Q + +  Q +  G  L+ A+A   L  P+ ++L
Sbjct: 278 GILLQGGIPILTAMG-MARGLLGNAAAQGLEQASQRVGEGLPLSDALAAGHLVTPVSLRL 336

Query: 337 TAIGESSGTLDQMLEKAASHYEEQVSQALDQLTSLLEPAIVLILGLLVGGLVVAMYLPIF 396
              GE SG L +MLE+ A  +++++ + ++    L EP ++  +GLL+G +V+ MY+PIF
Sbjct: 337 LRAGEQSGNLGEMLERCADFHDQEIGRWVEWFVKLFEPLLMTFIGLLIGLIVILMYMPIF 396

Query: 397 QLGSLI 402
           +L S I
Sbjct: 397 ELASSI 402