Pairwise Alignments

Query, 402 a.a., Type 4 fimbrial assembly protein PilC from Pseudomonas putida KT2440

Subject, 408 a.a., type II secretion system inner membrane protein GspF from Dickeya dianthicola ME23

 Score =  198 bits (503), Expect = 3e-55
 Identities = 131/405 (32%), Positives = 207/405 (51%), Gaps = 10/405 (2%)

Query: 7   LYHWHGTDANGAPVSGQTPGRSPAYVRAGLIRQGITVASLRPASG-----LAFSLPKRRE 61
           L+ +   +A G    G     S  + R  L  +G+    +    G       FSL  RR 
Sbjct: 3   LFQYQALNAQGKKSQGMQEADSARHARQLLREKGLVPVKIEEQRGEVTSRSGFSLSLRRS 62

Query: 62  K----ADPAGFSRQLATLLKAGVPLLQAFEVMGRSGCDAAQAALLERLKQDVASGLGLAD 117
                +D A  +RQLATL+ A +PL +A + + +       +AL+  ++  V  G  LA+
Sbjct: 63  HRISASDLALLTRQLATLVAAALPLEEALDAVAKQSEKPKLSALMAAVRAKVVEGHSLAE 122

Query: 118 ALQRHPAWFDALYCNLVRVGEQSGTLDRQLEQLAGMLEQRRVLHKKVRKAMIYPLLLLLT 177
           A+   P  F+ LYC +V  GE SG LD  L +LA   EQR+ +  ++++AMIYP +L L 
Sbjct: 123 AMGNFPGSFERLYCAMVAAGEASGHLDAVLNRLADYTEQRQQMRSRIQQAMIYPCVLTLV 182

Query: 178 GLGVSAILLLEVIPKFESMFSGMGAALPAFTQWVINLSTGLSRFAPLLLVMGVVMGVAVR 237
            + V +ILL  V+PK    F  M  ALP  T+ ++ +S  +  + P ++V+ V+  +  R
Sbjct: 183 AISVVSILLSAVVPKVVEQFIHMKQALPLSTRLLMGVSDAVRSYGPWVVVLLVLAVMGFR 242

Query: 238 QLYRQHAPARLWISRRVLGLPVFGKLLGQAALARFARSLATSYGAGVPLLDALGTVARVT 297
            L RQ    RL   RR+L LP+ G++      AR+AR+L+    + VPLL A+     V 
Sbjct: 243 VLLRQE-KHRLVFHRRLLFLPLIGRIARGLNTARYARTLSILNSSAVPLLQAMRISGDVL 301

Query: 298 GGDLHEQAVLRLRQGMANGQGLNQAMAGEPLFPPLLVQLTAIGESSGTLDQMLEKAASHY 357
             D     + +    +  G  LN+A+    LFPP++  + A GE SG LD ML +AA + 
Sbjct: 302 TNDYARFRLGQATDAVREGVSLNKALEQTSLFPPMMRHMIASGERSGELDGMLTRAADNQ 361

Query: 358 EEQVSQALDQLTSLLEPAIVLILGLLVGGLVVAMYLPIFQLGSLI 402
           + + S  +     L EP +V+ +  +V  +V+A+  PI QL +L+
Sbjct: 362 DREFSAQMTLALGLFEPLLVVSMAGIVLFIVLAILQPILQLNTLM 406