Pairwise Alignments

Query, 431 a.a., NADH dehydrogenase from Pseudomonas putida KT2440

Subject, 822 a.a., nitrite reductase large subunit NirB from Variovorax sp. OAS795

 Score = 51.6 bits (122), Expect = 9e-11
 Identities = 78/327 (23%), Positives = 128/327 (39%), Gaps = 59/327 (18%)

Query: 4   RIVIVGGGAGGLELATRLGKSLGKRKQAEITLVDTNLTHIWKPLLHEVAAGSLNSSEDEL 63
           ++V+VG G  G+     L K         +   + +  +  + LL  V AG     E  L
Sbjct: 5   KLVMVGNGMAGVRTLEELLKLAPDMYDITVFGAEPHPNYN-RILLSPVLAGEQTVDEIVL 63

Query: 64  NYVAQAKWNHFNFQLGR-MSGLDREGKQIQLAATLDEEGRELLPARTLGYDTLVIAVGSN 122
           N       NH     G+ +  +DR  + ++    +D +G     A    YD L++  GSN
Sbjct: 64  NSWEWYAENHITLHAGKKVVEVDRVKRIVR---AVDAQGGVTEAA----YDRLLMCTGSN 116

Query: 123 T-------NDFGTLGAAQHCLFLDTRKQAERFHQQLLNHYLRAHAGDVASEKISVAIVGA 175
                    D   + A +     D   +  R H+                   +  ++G 
Sbjct: 117 PFMLPVPGKDLKGVIAYRDIADTDYMIETARTHK-------------------NAVVIGG 157

Query: 176 GATGVELAAELHHAAHELAAYGLDRIQPKDMHITLIEAGPRVLPA-LPERISVPVHKTLE 234
           G  G+E            AA GL     + M++T++   P ++   L +     + K+LE
Sbjct: 158 GLLGLE------------AANGL---MLRGMNVTVVHVMPWLMERQLDDVAGKLLQKSLE 202

Query: 235 KLGVKVMTNAAVSEVTED------GLKTKDGEVIQASLKVWAAGIRAPGFLKDIDGLETN 288
             G+K +  A   E+  +       ++ KDG  + A L V A GIR    L +   L  +
Sbjct: 203 DRGLKFLIGAQTQELVGNDQGRVSAIRFKDGTEVAADLVVMAVGIRPNTELAEKMRLHCH 262

Query: 289 RINQLVVRPTLQTTRDDNIFAFGDCAA 315
           R   +VV  TLQT  D  I++ G+CAA
Sbjct: 263 R--GIVVTDTLQTVTDARIYSVGECAA 287