Pairwise Alignments

Query, 854 a.a., Chaperone protein ClpB from Pseudomonas putida KT2440

Subject, 909 a.a., T6SS AAA+ chaperone ClpV (TssH) from Variovorax sp. SCN45

 Score =  540 bits (1391), Expect = e-157
 Identities = 327/857 (38%), Positives = 480/857 (56%), Gaps = 52/857 (6%)

Query: 5   RLTSKLQLAISDAQSLAVGMDHPAIEPVHLLQALLEQQGGSIKPLLMQVGFDINGLRQGL 64
           +L S    AI  A        +P +E  H    LL+ Q   +  ++   G D++ + + +
Sbjct: 12  KLNSLAYKAIEGATVFCKMRGNPYVELEHWFAQLLQAQDSDLHRVIQHYGLDVSVIAKDM 71

Query: 65  VKELDQLPKIQNPTGDVNMSQDLARLLNQADRLAQ-QKGDQFISSELVLLAAMDENSKLG 123
              LD+LP+    T   + S  +   + +A   A  Q G+  + +  +L+  +   S   
Sbjct: 72  TAALDRLPR--GATAISDFSPHIENAIERAWTYATLQFGEAQVRTGYILVGMLKTQSLRN 129

Query: 124 KLL-LSQGVSKKALENAINN--------------------LRGGAAVNDANAEESR---- 158
            L  LS+   K  +E+  +N                    +  GA   DA A        
Sbjct: 130 PLFGLSKQFEKVKVEDLADNFAKICDASPEAQMRAQDGTGMGSGAPGEDAGAMAPAAMGK 189

Query: 159 -QALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTAIAE 217
             AL K+ VDLT++A++G++DPV GRD+EIR+ V +L RR +NNP+L GE GVGKTA+ E
Sbjct: 190 GDALKKFAVDLTEKAKKGEMDPVTGRDEEIRQIVDILMRRRQNNPLLTGEAGVGKTAVVE 249

Query: 218 GLAQRIINGEVPDGLKGKRLLALDMGALIAGAKYRGEFEERLKSLLNELSKQEGQIILFI 277
           G AQR+  G+VP  LK  +LL LD+G L AGA  +GEFE+RL+ +++E+      IILFI
Sbjct: 250 GFAQRLARGDVPPQLKDVKLLTLDIGLLQAGASMKGEFEQRLRQVIDEVQSSPTPIILFI 309

Query: 278 DELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLNEYRQFIEKDAALERRFQKVL 337
           DE+HT+VGAG   G  DA N+LKPALARG L  +GATT  EY+++IEKD AL RRFQ V 
Sbjct: 310 DEIHTLVGAGGAAGTGDAANLLKPALARGNLRTIGATTWAEYKKYIEKDPALTRRFQVVQ 369

Query: 338 VEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLIDEA 397
           V EP E+  I +LRG+    E HH+V + D AI AA KLSHRYI  RQLPDKA+ L+D A
Sbjct: 370 VPEPDEQKAILMLRGVASVLEKHHRVQLLDEAIEAAVKLSHRYIPARQLPDKAVSLLDTA 429

Query: 398 ASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDEA--AKKRLEKLTEEIERLEREY 455
            +R+ +   + P  ++   RR+  L VE + + +EE       KR  ++   +   + + 
Sbjct: 430 CARVAVSQHATPPEVEDCMRRIEGLTVEQEIIGREEAIGIDVTKRAAQVAALLAESKVQL 489

Query: 456 SDLEEIWASEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNR------------MAELQY 503
             L   W  EK  V    +++ K+    + +++ +  GD                +E + 
Sbjct: 490 DALNARWQEEKGLVDRLLELRAKLRAGNKPVDSVKADGDAKADVPPPQPSPSGGGSEDRA 549

Query: 504 GVIPDLERSLQMVDQHGKTDNQLLRNKVTEEEIAEVVSKWTGIPVAKMLEGEREKLLKME 563
            ++ +L   LQ      + ++ L+   V E+ +A VV+ WTGIPV +M++ E E +LK+ 
Sbjct: 550 ALLAEL-HELQAKIHAVQGESPLILPSVDEQAVASVVADWTGIPVGRMVKNEVEAVLKLA 608

Query: 564 ELLHQRVIGQSEAVTAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALAEFLF 623
           + L+QRVIGQ   +  +A  ++ SRA L +P +P G F+  G +GVGKTE   ALAE L+
Sbjct: 609 DTLNQRVIGQKHGLEMIARRIQTSRARLDNPQKPIGVFMLCGTSGVGKTETALALAEALY 668

Query: 624 DTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAH 683
             E+ ++ I+MSEF E H+V+ L GAPPGYVGY EGG LTEAVRR+PYSVVLLDEVEKAH
Sbjct: 669 GGEQNIITINMSEFQEAHTVSTLKGAPPGYVGYGEGGILTEAVRRRPYSVVLLDEVEKAH 728

Query: 684 PDVFNVLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQELVGDRE--AQRAAVMD 741
           PDV  +  QV + G + D  GR +DF+NT+I++T+N GS  +  +  D E      A+ D
Sbjct: 729 PDVHEIFFQVFDKGWMEDGEGRMIDFKNTIILLTTNAGSELVMSMCRDPELLPDSNALAD 788

Query: 742 AVGAH----FRPEFINRIDEVVVFEPLGREQIAGITEIQLGRLRSRL-LERELSLSLSPE 796
           A+ A     F P  + RI   + + PL  + +  I  +QLGR++ R+     +    S  
Sbjct: 789 ALKAPLMKVFPPALLGRI-VTIPYYPLSPDMMKKIVRLQLGRIKKRVEANHGVPFDYSDA 847

Query: 797 ALDKLIAVGYDPVYGAR 813
            +D+++A   DP  G R
Sbjct: 848 VVDQVVARCQDPESGGR 864