Pairwise Alignments

Query, 854 a.a., Chaperone protein ClpB from Pseudomonas putida KT2440

Subject, 872 a.a., type VI secretion system ATPase TssH from Dickeya dadantii 3937

 Score =  491 bits (1264), Expect = e-143
 Identities = 306/863 (35%), Positives = 475/863 (55%), Gaps = 60/863 (6%)

Query: 3   IDRLTSKLQLAISDAQSLAVGMDHPAIEPVHLLQALLEQQGGSIKPLLMQVGFDINGLRQ 62
           ++RL    +  + +A +L +      I   HLL  +LE     ++ +L + G        
Sbjct: 10  VERLNPLCRHMMEEAAALCIQHQGAEIRIEHLLLKMLETPLCDVRQILKRAGM------- 62

Query: 63  GLVKELDQLPKIQNP--------TGDVNMSQDLARLLNQADRLA--QQKGDQFISSELVL 112
               E D+L  +  P        +G  + S  L   L  +  LA  + +  +  S  L+L
Sbjct: 63  ----EADELAALLQPNAADKGFESGYPSFSPLLVEWLQDSWLLASAELQHARLRSGVLLL 118

Query: 113 LAAMDEN-----------SKLGKLLLSQGVSKKALENAINNLRGGAAVNDANAEESRQAL 161
           +  M              +++ + LL Q   +   ++A   +   A      A  +   L
Sbjct: 119 VLLMTPTRYLSATVTRQLAQINRELLRQQFDEWVKDSAETEVIAAAGATPEQAAAATTQL 178

Query: 162 DKYTVDLTKRAEEGKLDPVIGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTAIAEGLAQ 221
            +YT ++T+ A +GKLDPV+ RD EI   + +L RR KNNP+++GE GVGK+A+ EGLA 
Sbjct: 179 ARYTQNVTESARQGKLDPVLCRDHEIDLMIDILSRRRKNNPIVVGEAGVGKSALIEGLAL 238

Query: 222 RIINGEVPDGLKGKRLLALDMGALIAGAKYRGEFEERLKSLLNELSKQEGQIILFIDELH 281
           RI+ G VP+ L+   LL LD+GA+ AGA  +GEFE+R K ++ E+ +    +ILFIDE H
Sbjct: 239 RIVAGLVPERLRDVELLTLDLGAMQAGASVKGEFEKRFKGVMQEVKEAPKPVILFIDEAH 298

Query: 282 TMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLNEYRQFIEKDAALERRFQKVLVEEP 341
           T++GAG   G +D  N+LKPALARGEL  + ATT +EY++++EKDAAL RRFQ V V EP
Sbjct: 299 TLIGAGNQAGGLDVSNLLKPALARGELRTIAATTWSEYKKYVEKDAALSRRFQLVKVGEP 358

Query: 342 SEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLIDEAASRI 401
           + ++   ILRGL+  YE  H V I + A+ AAA LS RYI+ RQLPDKAID++D A +R+
Sbjct: 359 NVDEATVILRGLRSIYEQSHGVLIDEEALQAAANLSARYISGRQLPDKAIDVLDTACARV 418

Query: 402 RMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDEA---AKKRLEKLTEEIERLEREYSDL 458
            + + + P  + +L  RL Q  +E   L+++         +RL  L +  E      + L
Sbjct: 419 AINLTTPPRAVSQLQTRLHQQALEIAQLERQGRIGLGDTAERLATLRDASETDAATLAQL 478

Query: 459 EEIWASEKAEVQGSAQIQQKI--EQSRQELEAARRKGDLNRMAELQYGVIPDLERSLQMV 516
           E  W  +K  VQ    ++  +  ++  ++ +AA    +L            D ER+L  +
Sbjct: 479 EADWQRQKTLVQQIVALRTALLADEPAEDFDAAAAAAELT-----------DSERALAEL 527

Query: 517 DQHGKTDNQLLRNKVTEEEIAEVVSKWTGIPVAKMLEGEREKLLKMEELLHQRVIGQSEA 576
            Q     + L+   V + +IA V+++WTG+P+ ++ +GE + + ++ + L   + GQ  A
Sbjct: 528 QQ----PSVLVSPHVDKTQIASVIAEWTGVPLNRISQGELDVVTRLPDYLGDSIKGQQLA 583

Query: 577 VTAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEAMVRIDMSE 636
           +  +   +  +RA L  P RP G+FL +GP+GVGKTE    +A+ +F     +  I+MSE
Sbjct: 584 IAQLHKHLLTARADLRRPGRPLGAFLLVGPSGVGKTETVVQIADLMFGGRNYLTTINMSE 643

Query: 637 FMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFNVLLQVLED 696
           + EKH+V+RLIG+PPGYVG+ EGG LTEA+R+KPYSVVLLDEVEKAHPDV N+  Q  + 
Sbjct: 644 YQEKHTVSRLIGSPPGYVGFGEGGVLTEAIRQKPYSVVLLDEVEKAHPDVLNLFYQAFDK 703

Query: 697 GRLTDSHGRTVDFRNTVIVMTSNLGSAQIQELV-----GDREAQRA-AVMDAVGAHFRPE 750
           G L D  GR +D RN V  +TSNLG   I          DR+ +   A+   + A F+P 
Sbjct: 704 GELADGEGRVIDCRNVVFFLTSNLGFQTIVNFAERVNFADRQNELLDALYPELAAFFKPA 763

Query: 751 FINRIDEVVVFEPLGREQIAGITEIQLGRLRSRLLER-ELSLSLSPEALDKLIAVGYDPV 809
            + R+ EV+ + PLG + +  I + +L RL + L +R    + +     ++++ +     
Sbjct: 764 LLARM-EVIPYLPLGNDTLVEIVQGKLSRLVTLLQQRFGAEVVVDAAVPEEILRLANRSE 822

Query: 810 YGARPLKRAIQRWIENPLAQLIL 832
            GAR L+  I   +  P++  +L
Sbjct: 823 NGARMLESVIDGALLPPVSLQLL 845