Pairwise Alignments

Query, 854 a.a., Chaperone protein ClpB from Pseudomonas putida KT2440

Subject, 892 a.a., ATP-dependent Clp protease, ATP-binding subunit from Agrobacterium fabrum C58

 Score =  525 bits (1352), Expect = e-153
 Identities = 328/855 (38%), Positives = 482/855 (56%), Gaps = 54/855 (6%)

Query: 3   IDRLTSKLQLAISDAQSLAVGMDHPAIEPVHLLQALLEQQGGSIKPLLMQVGFDINGLRQ 62
           +  L   L++ +  A S+AV M H  ++  H L A+++   G       ++   +  L+ 
Sbjct: 10  VGALEPDLRVTLEAAASVAVRMGHRYVDIPHWLLAVVD--AGIYAETFDELKIPLPVLKA 67

Query: 63  GLVKELDQLPKIQNPTGDVNMSQDLARLLNQADRLAQQKGDQFISSELVLLAAMDENSKL 122
            + + L++   I      +++SQ++     +A  LA  +  +   +   LL AMDE + L
Sbjct: 68  EIGRSLEEA--IIGDGEALSLSQNILTAAREAWILASLEAGRDRVTLCDLLLAMDEETSL 125

Query: 123 GKLLLSQGVSKKALEN-AINNLRGGA----------AVNDANAEESRQA------LDKYT 165
              + S   S KA++  A+  LR  A          A+  +    S QA      L  YT
Sbjct: 126 RSFVRSAFPSLKAMDRGALERLRSSAENGAGVDVPSALTSSGEAGSAQAAGQNDFLRLYT 185

Query: 166 VDLTKRAEEGKLDPVIGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTAIAEGLAQRIIN 225
            D+T  A  GK+DPVIGRDDE+R+ V +L RR +NNP+L+GE GVGKTA+AE LA  I +
Sbjct: 186 HDMTTDARNGKVDPVIGRDDELRQLVDILTRRRQNNPILVGEAGVGKTAVAEALALEIAS 245

Query: 226 GEVPDGLKGKRLLALDMGALIAGAKYRGEFEERLKSLLNELSKQEGQIILFIDELHTMVG 285
           G VP+ L+   LL LD+  L AGA  +GEFE RL  +++ + +    +ILFIDE H +VG
Sbjct: 246 GNVPEKLRNVCLLNLDISLLQAGAGVKGEFERRLHGVIDAVKRSAEPVILFIDEAHGLVG 305

Query: 286 AGKGEGAMDAGNMLKPALARGELHCVGATTLNEYRQFIEKDAALERRFQKVLVEEPSEED 345
           AG   G  DA N+LKPALARGE+  V ATT +EY+++ EKDAAL RRFQ V V EP E  
Sbjct: 306 AGGAAGQGDAANILKPALARGEVRTVAATTWSEYKKYFEKDAALTRRFQPVHVREPDEAT 365

Query: 346 TIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLIDEAASRIRMEI 405
            I +LRG+ + +  HH V + D AI+AA +LS RY+  RQLPDKA+ L+D AA+ + +  
Sbjct: 366 AIRMLRGVADTFVSHHNVTVRDEAIVAAVQLSARYMPARQLPDKAVSLLDTAAAAVSLAR 425

Query: 406 DSKPEVLDRLDRRLIQLKVESQALKKE-EDEAAKKRLEKLTEEIERLEREYSDLEEIWAS 464
            + PE L  ++     L  E   L +E +DE  + R++ + +E+ERLE    DL   + +
Sbjct: 426 QTLPERLRAMESERHLLSDELNWLLREPQDEDMQNRIQSIRDELERLEAGIDDLRGRYDA 485

Query: 465 EKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYGVIPDLERSLQMVDQHGKTDN 524
           E AE+   ++ Q                      AE     +  L  + +M   + +   
Sbjct: 486 EMAELAALSEEQP---------------------AETGASNVSHLRPATEMRPANAE--- 521

Query: 525 QLLRNKVTEEEIAEVVSKWTGIPVAKMLEGEREKLLKMEELLHQRVIGQSEAVTAVANAV 584
           +L+   V  E IA VVS+WTGIP+ K+L  + E    ++  + QRV+GQ  A+T +A+A+
Sbjct: 522 RLVPTVVDREAIAAVVSRWTGIPLGKLLADQIESARTLDVRMRQRVVGQDAAITRIADAM 581

Query: 585 RRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEKHSVA 644
           R +RAGLSDP RP   F  +G +G GKTE   +LA+ L+     +  I+MSEF E+H V+
Sbjct: 582 RTARAGLSDPRRPPAVFFLVGMSGTGKTETALSLADLLYGGNSHLTTINMSEFKEEHKVS 641

Query: 645 RLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFNVLLQVLEDGRLTDSHG 704
            L+G+PPGYVG+ EGG LTEAVRR+P+ V+LLDE++KAHP V ++  QV + G L D  G
Sbjct: 642 LLLGSPPGYVGFGEGGVLTEAVRRRPFGVLLLDEIDKAHPGVQDIFYQVFDKGVLRDGEG 701

Query: 705 RTVDFRNTVIVMTSNLGSAQIQELVGD------REAQRAAVMDAVGAHFRPEFINRIDEV 758
           R VDF+NT I MT+N GS  +  L  D       EA  A +M  +   F+P F+ R   +
Sbjct: 702 RDVDFKNTTIFMTANTGSELLSALSADPDTMPEGEALEALLMPELTKQFKPAFLGR-TII 760

Query: 759 VVFEPLGREQIAGITEIQLGRLRSRLLER-ELSLSLSPEALDKLIAVGYDPVYGARPLKR 817
           + F PLG E++A + ++Q+G++R R+L      L LS  A D L+A       GAR ++ 
Sbjct: 761 LPFMPLGAEELASVVDMQIGKIRDRVLATYGTDLRLSDAARDALVARAGASEIGARAIEI 820

Query: 818 AIQRWIENPLAQLIL 832
            I + +  PL+   L
Sbjct: 821 MIGKDLLPPLSSFFL 835