Pairwise Alignments

Query, 320 a.a., 23S rRNA pseudouridine(1911,1915,1917) synthase from Pseudomonas putida KT2440

Subject, 325 a.a., 23S rRNA pseudouridine(1911/1915/1917) synthase RluD from Dickeya dianthicola ME23

 Score =  376 bits (965), Expect = e-109
 Identities = 185/319 (57%), Positives = 237/319 (74%), Gaps = 1/319 (0%)

Query: 1   MSEIIQLSAEVPSELGGQRLDQVAAQLFAEYSRSRLTSWIKEGRLTVDGAVV-RPRDLVH 59
           MS+ +QL+A V     GQRLDQ  A+LF +YSRSR+ +WI E R+ ++G +V +P++ V 
Sbjct: 1   MSQQVQLTATVAESQLGQRLDQALAELFPDYSRSRIKTWILEQRVQINGNMVDKPKEKVL 60

Query: 60  GGSQLALEAEQEAQGEWIAEDIELDIVYEDDHILVINKPAGLVVHPAAGHASGTLLNALL 119
           GG  +A++A  E    W A+ I LDIVYED  ILVINKP  LVVHP AG+  GT+LNALL
Sbjct: 61  GGESVAIDALIEEDARWEAQPISLDIVYEDGDILVINKPRNLVVHPGAGNPDGTVLNALL 120

Query: 120 HHVPDIVNVPRAGIVHRLDKDTTGLMVVAKTLQAQTKLVEQMQARKVSRIYECIVIGVVT 179
           HH P+IV+VPRAGIVHRLDKDTTGLMVVAKT+ AQT+LVE +QAR+++R YE + IG +T
Sbjct: 121 HHYPEIVDVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVESLQAREITREYEAVAIGTMT 180

Query: 180 AGGKIDAPIGRHGGMRQRMAVTDGGKPAVSHYRVLKRFRSHTHVRVKLETGRTHQIRVHM 239
           AGG ++ PI RH   R  MAV   GKPAV+HYR+++ FR+HT +R++LETGRTHQIRVHM
Sbjct: 181 AGGTVEEPIARHSTKRTHMAVHPMGKPAVTHYRIMEHFRAHTRLRLRLETGRTHQIRVHM 240

Query: 240 AHVGFPLVGDQTYGGRFRIPPAASPTMVEAVKTFPRQALHARFLALAHPITGEVMKWESP 299
           AH+  PLVGD  YGGR R+P  AS T +E ++ F RQALHA  L L HPI+G  M+W +P
Sbjct: 241 AHINHPLVGDPLYGGRPRLPKGASETFIETLRNFDRQALHATMLRLYHPISGIEMEWHAP 300

Query: 300 LPDDFVWLLSLLNQDRESF 318
           LP D V L++ L  D ++F
Sbjct: 301 LPQDMVDLIAALKADTDAF 319