Pairwise Alignments

Query, 339 a.a., Outer membrane protein assembly factor BamD from Pseudomonas putida KT2440

Subject, 288 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score =  114 bits (286), Expect = 2e-30
 Identities = 74/277 (26%), Positives = 135/277 (48%), Gaps = 19/277 (6%)

Query: 6   LLLIAILGLTAACSSNKEVIDENLSEAE-----LYQQAQADLDNSSYTSAVNKLKALESR 60
           L+L+    +  AC S+ ++    L         LY+Q  A+++  + T A  K +A++ +
Sbjct: 20  LMLVGASVVVTACQSDPDIDITKLGVETDPPDVLYKQGLANMNAGNMTEASRKFEAIDKQ 79

Query: 61  YPFGRYADQAQLELIYANYKNSEPEAAKSAAERFIRLHPQHPNVDYAYYLKGLTSFDQDR 120
           YPF  +  +A +   +   + ++ + A ++  RF+R +P+  +  Y  Y+ GL    Q  
Sbjct: 80  YPFTEWGQKALVMQTFIATRTNKNDVAITSGSRFLRQYPRSKDAAYVQYMIGLAYSKQ-- 137

Query: 121 GLLARFLPLDMTKRDPGAARDSYNEFAQLTSRFPNSRYAPDAKQRMIYLRNLLASYEIHV 180
                   +    +D  AA+ +     ++ + +P+S Y  DA+ ++ + R+ LA  E+ V
Sbjct: 138 --------ISDVTQDQRAAQRTIEAMNKVVNDYPSSEYVADAQAKIRFARDQLAGREMQV 189

Query: 181 ADYYLSRQAYVAAANRGRYVVENFQETPSVGDGLAVMVESYQKLHLDELAATSLETLKLN 240
             YYL R+ Y+AA +R R VVE +Q T  + + LA + E+Y  + L + A T+   L  N
Sbjct: 190 GRYYLERKEYLAAVSRFRIVVEQYQNTNQIEEALARLTEAYYAMGLVDEAQTAAAVLGNN 249

Query: 241 YPDHPSLVDG----EFQPKQTESDGRGWLSKATLGLI 273
           YPD     D     + Q  +   +   W+S+A   LI
Sbjct: 250 YPDSQWYADSYKLLKGQGLEPRENKGSWISRAGKKLI 286