Pairwise Alignments

Query, 400 a.a., Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

Subject, 407 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score = 83.6 bits (205), Expect = 1e-20
 Identities = 90/373 (24%), Positives = 150/373 (40%), Gaps = 16/373 (4%)

Query: 37  LKSMSGAFASY-GKYADMGSRLAIAEHPQLL-GHPLKYKVIDTEGNAGKA---VRKVQEA 91
           L  MSGA++   G  +   +++AI +  + + G P++    D +  A  A    RK  + 
Sbjct: 38  LTDMSGAYSDLAGSGSVEAAKMAIEDFGKPINGKPVELVSADHQNKADIASATARKWYDT 97

Query: 92  IGQDGARFFQGCTLSSSALAVSKEIHKAGGVFMTPVGAD-EITGKDCNASTFRWSVPTYG 150
              D      G   S +ALAV +   + G V +    A   +T K C+ +   W+   Y 
Sbjct: 98  QDVDAIFDING---SVAALAVREVAKEKGKVDINSGAASMSLTNKACSPTGLHWTYDVYS 154

Query: 151 AIRETLVPMSRQLPQAKRWYTITPQYVFGDALLDNARKVFAELGVEHIGNSYHSLQEQEF 210
               T   +  +    K WY IT  Y FG  L +   K+  E G    G+  H     + 
Sbjct: 155 LAAGTGNALVSE--GFKTWYFITADYTFGHDLENQVAKIVKEKGGTVKGSVAHPFGTSDV 212

Query: 211 SGYLTNAIAAKPDVLVLLNFGSQASNALRQAVNFGIKDRMKVLMVWSAGLDQFQELGSDV 270
           S YL  A A+   ++ + N GS   N ++QA  FGI    + L      L     +G + 
Sbjct: 213 SSYLLQAQASGAKIIAMANAGSDTINTIKQAREFGITQGGQTLAALLLFLTDIHSVGLEA 272

Query: 271 LEGVYLGAQYWHQVDTPLNKLLVAATRKAYGINPNYPLAADYIGTKVMLEAIVKAGSLDG 330
            +G+ L   ++   D           ++  G  P    A  Y      L+A   AG+ +G
Sbjct: 273 AQGMVLTTGFYWDTDDKTRAFSKRFAQRMNGKMPTMVHAGVYSSVLHYLKAAEAAGTDEG 332

Query: 331 AAVSAALQGMRFQGPTGEE-LIRPGDHQVLKDYYLLRGKPQGQMR---DEDDLAEVISSG 386
             V A ++ +       +   IRP D +++ D YL + K   + +   D  ++  VI   
Sbjct: 333 EKVIAKMRELPIDDMFAKNGKIRP-DGRMVHDMYLAKVKSPKESKGPWDYYEIVRVIPGD 391

Query: 387 RSFVEVDHTGCAL 399
            +F  +  + C L
Sbjct: 392 EAFQPLSDSTCPL 404