Pairwise Alignments

Query, 400 a.a., Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

Subject, 406 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score = 95.5 bits (236), Expect = 2e-24
 Identities = 97/385 (25%), Positives = 160/385 (41%), Gaps = 14/385 (3%)

Query: 8   KAGLALGALGSLPLGAHRAFADQPLTFYGLKSMSGAFASYGKYADMGSRLAIAEHPQLLG 67
           +A LA  A+G+L  GA +A  D  +    L  MSG +A       + +    A+      
Sbjct: 10  RALLAAAAIGALLTGAAKA-EDTTVKLGVLNDMSGVYADISGPGSVVAAQMAADDFMAKN 68

Query: 68  HPLKYKVI--DTEGNAGKAVRKVQEAIGQDGARFFQGCTLSSSALAVSKEIHKAGGVFMT 125
              K +V+  D +          ++   Q+        T SS ALAVS    +   +F+ 
Sbjct: 69  KGFKIEVVGADHQNKPDVGASIARKWYDQENVDAILDVTTSSVALAVSDITKEKNKIFLV 128

Query: 126 PVGA-DEITGKDCNASTFRWSVPTYGAIRETLVPMSRQLPQAKRWYTITPQYVFGDALLD 184
             G   ++TG  C+ +T  W+  T+     T   +++Q      W+ IT  Y FG AL  
Sbjct: 129 SGGGTSDLTGAKCSPNTVHWTYDTWALANGTGSALTKQ--GGSPWFFITADYAFGAALER 186

Query: 185 NARKVFAELGVEHIGNSYHSLQEQEFSGYLTNAIAAKPDVLVLLNFGSQASNALRQAVNF 244
           +A       G +  G+  H L   +FS +L  A ++   V+ L N G+    A++QA  F
Sbjct: 187 DASAAVKAAGGKVAGSVKHPLSNTDFSSFLLQAQSSGAKVIGLANAGNDLITAVKQASEF 246

Query: 245 GIK---DRMKVLMVWSAGLDQFQELGSDVLEGVYLGAQYWHQVDTPLNKLLVAATRKAYG 301
           GI     ++  L+++S+ +   + LG    +G+ L   ++  ++            K  G
Sbjct: 247 GITQGGQQLAGLLIFSSDV---KALGLQAAQGLVLTDAFYWDLNDDTRAFSKRFGAKFNG 303

Query: 302 INPNYPLAADYIGTKVMLEAIVKAGSLDGAAVSAALQGMRFQGPT-GEELIRPGDHQVLK 360
             P    A  Y      L AI  A + D   V   ++      P  G+  IR  D + + 
Sbjct: 304 KMPTSAQAGVYSSAMHYLNAIKDAKTKDAPKVMEQMRATPINDPLFGKGEIRI-DGRAIH 362

Query: 361 DYYLLRGKPQGQMRDEDDLAEVISS 385
             YLL+ K     + E DL EV+S+
Sbjct: 363 PMYLLKVKKPADSKGEWDLFEVVST 387