Pairwise Alignments

Query, 400 a.a., Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

Subject, 415 a.a., Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein from Xanthobacter sp. DMC5

 Score =  127 bits (318), Expect = 8e-34
 Identities = 102/392 (26%), Positives = 183/392 (46%), Gaps = 13/392 (3%)

Query: 1   MQRRTLLKAGLALGALGSLPLGAH-RAFADQPLTFYGLKSMSGAFASYGKYADMGSRLAI 59
           + RRT+L AGL    +G +   A  RA AD     +    ++G F +  K     + LA+
Sbjct: 12  VSRRTVL-AGLGAAGVGLIASPAIVRAQADTIRIGFPTP-LTGPFGAEAKDQVKSAELAV 69

Query: 60  A---EHPQLLGHPLKYKVIDTEGNAGKAVRKVQEAIGQDGARFFQGCTLSSSALAVSKEI 116
               +   + G  ++  V D + NAG+A  +  E I +D      G   S+  LAV++  
Sbjct: 70  KLVNDKGGIAGRKVELLVRDDKLNAGEAATRTLELIEKDKVHAVVGALSSAVQLAVNEVT 129

Query: 117 HKAGGVFMTPVGADEITG-KDCNASTFRWSVPTYGAIRETLVPMSRQLPQAKRWYTITPQ 175
              G ++++   +D I   KD +  TF  ++  +     T         +  +   +   
Sbjct: 130 RARGVIYVSISQSDTINEVKDFSKYTFHEALNPH---MTTAAVARATFKKGSKVALLGAD 186

Query: 176 YVFGDALLDNARKVFAELGVEHIGNSYHSLQEQEFSGYLTNAIAAKPDVLVLLNFGSQAS 235
           Y +G  ++   ++   ELG E +G   H     ++S  +    + KPD+L + NFG   +
Sbjct: 187 YAYGHEMMRGFKRAAGELGAEIVGEILHPFGAADYSTLMPRIRSLKPDILAICNFGRDQA 246

Query: 236 NALRQAVNFGIKDRMKVLMVWSAGLDQFQELGSDVLEGVYLGAQYWHQVDT--PLNKLLV 293
           N+++QA +FG+K +M++++      +Q   +  DV EG+  GA Y+  ++   P  K   
Sbjct: 247 NSIKQANDFGMKKQMQIVVPVLLH-NQRIAVAPDVFEGIIGGANYYWALENTIPSAKAFN 305

Query: 294 AATRKAYGINPNYPLAADYIGTKVMLEAIVKAGSLDGAAVSAALQGMRFQGPTGEELIRP 353
            A + AYG  P    A  + G   +L A+ KAG  D   V  AL+G+++    G +  R 
Sbjct: 306 DAYKAAYGSLPTDYGAYGFTGVSALLLAMAKAGGTDTDKVVEALEGLKYDVAKGPQYFRK 365

Query: 354 GDHQVLKDYYLLRGKPQGQMRDEDDLAEVISS 385
            DHQ ++   +L+ K +  M+ E DL +++ +
Sbjct: 366 CDHQSVQSVLVLKSKAKADMKSEQDLFDIVEN 397