Pairwise Alignments

Query, 400 a.a., Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

Subject, 395 a.a., Leu/Ile/Val-binding protein from Xanthobacter sp. DMC5

 Score = 89.0 bits (219), Expect = 2e-22
 Identities = 88/358 (24%), Positives = 154/358 (43%), Gaps = 12/358 (3%)

Query: 7   LKAGLALGALGSLPLGAHRAFADQPLTFYGLKSMSGAFASYGKYADMGSRLAIAEHPQ-- 64
           ++ G AL A   LP+ A    A +PL      +++G +A  G         A AE     
Sbjct: 5   MRLGGALAAAMMLPVAA---MAQEPLRIGVPTALTGTYADLGSQVKRAIAFAAAEANAAG 61

Query: 65  -LLGHPLKYKVIDTEGNAGKAVRKVQEAIGQDGARFFQGCTLSSSALAVSKEIHKAGGVF 123
            + GH ++ + +DTE     A R+  E +   G +   G   S  ALA++  + +   ++
Sbjct: 62  GIDGHKVEVEYLDTEAKPDLA-RRQAEKLALQGNKVLIGAIASGEALAIAPLLARWDALY 120

Query: 124 MTPVG-ADEITGKDCNASTFRWSVPTYGAIRETLVPMSRQLPQAKRWYTITPQYVFGDAL 182
           +     +D+IT + C    FR + P   +   T+ P  +   + + W  +     +G  +
Sbjct: 121 IATTNKSDKITAEACVPRMFRVNRPD-SSDAATMAPWLKGRSE-ETWAVMAADIAWGRDV 178

Query: 183 LDNARKVFAELGVEHIGNSYHSLQEQEFSGYLTNAIAAKPDVLVLLNFGSQASNALRQAV 242
             +  K  A  G + +  ++ +L   +F+ Y+     +    + +   G  A N   QA 
Sbjct: 179 AASFGKAAAGQGKKVVLENFSALGTNDFATYIQKIKDSGAKGVWVALAGRDAVNFAMQAK 238

Query: 243 NFGIKDRMKVLMVWSAGLDQFQELGSDVLEGVYLGAQYWHQVDTPLNKLLVAATRKAY-G 301
             G+ D   V  V     +    +G D  +GV     Y   +D P NK  VAA  KAY G
Sbjct: 239 QAGLLDSATVAGVSFVTDNTVASIG-DAAKGVAGIINYSSTLDNPANKAFVAAWEKAYPG 297

Query: 302 INPNYPLAADYIGTKVMLEAIVKAGSLDGAAVSAALQGMRFQGPTGEELIRPGDHQVL 359
             P       YI  +V+ +A+  AGS+  A ++ AL G  +    G++ +R  D+Q++
Sbjct: 298 TTPTNFEGETYIAMQVLFQAVKAAGSVKAADIAKALPGRTYATILGDQQMRREDNQLV 355