Pairwise Alignments

Query, 400 a.a., Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

Subject, 421 a.a., branched-chain amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 66.6 bits (161), Expect = 1e-15
 Identities = 88/367 (23%), Positives = 145/367 (39%), Gaps = 26/367 (7%)

Query: 1   MQRRTLLKAGLALGALGSLPLGAHRAFADQPLTFYGLKSMSGAFA-SYGKYADMGSRLA- 58
           M+RR+L+KA     ++ ++ +    A A + +    L S+SG  A S     DM      
Sbjct: 1   MKRRSLIKAFTLTASIAAMGM-TWTAQAAETIKVGILHSLSGTMAISETSLKDMALMTID 59

Query: 59  -IAEHPQLLGHPLKYKVIDTEGNAGKAVRKVQEAIGQDGARFFQGCTLSSSALAVSKEIH 117
            I     + G  L+  V+D   N      K ++ + QD      GC  S S  +V     
Sbjct: 60  EINAKGGVNGKMLEAVVVDPASNWPLFAEKGRQLLTQDKVAVVFGCWTSVSRKSVLPVFE 119

Query: 118 KAGGVFMTPVGADEITGKDCNASTF-RWSVPTYGAIRETLVPMSRQLPQAKRWYTITPQY 176
           +  G+   PV   +  G++ + + F   + P   AI      MS +   AKR++ +   Y
Sbjct: 120 ELNGLLFYPV---QYEGEEMSPNVFYTGAAPNQQAIPAVEYLMSEEGGSAKRFFLLGTDY 176

Query: 177 VFGDALLDNARKVFAELGV--EHIGNSYHSLQEQEFSGYLTN----AIAAKPDVLVLLNF 230
           V+        R      GV  + I   Y      ++   + N    +   K  V+  +N 
Sbjct: 177 VYPRTTNKILRAFLHAKGVADKDIEEVYTPFGHADYQTIVANIKKFSAGGKTAVISTVN- 235

Query: 231 GSQASNALRQAVNFGIKDRMKVLMVWSAGLDQFQELGSDVLEGVYLGAQYWHQVDTPLNK 290
           G       ++  N G+K     ++ +S G ++ + + +  L G      Y+  V+ P+N 
Sbjct: 236 GDSNVPFYKELANQGLKATDVPVVAFSVGEEELRGIDTKPLVGNLAAWNYFQSVENPVNT 295

Query: 291 LLVAATRKAYGINPNYP----------LAADYIGTKVMLEAIVKAGSLDGAAVSAALQGM 340
             VA   KAY    N P          + A Y+G  +  +A  KA S D   V  AL G 
Sbjct: 296 KFVADW-KAYAKKHNLPGADKAVTNDPMEATYVGIHMWAQAAEKAKSTDVDKVREALAGQ 354

Query: 341 RFQGPTG 347
            F  P+G
Sbjct: 355 TFAAPSG 361