Pairwise Alignments

Query, 400 a.a., Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

Subject, 397 a.a., Broad-specificity amino acid ABC transporter, substrate-binding protein from Variovorax sp. SCN45

 Score =  106 bits (265), Expect = 1e-27
 Identities = 104/393 (26%), Positives = 170/393 (43%), Gaps = 21/393 (5%)

Query: 18  SLPLGAHRAFADQPLTFYGLKSMSGAFASY-GKYADMGSRLAIAEHP-QLLGHPLKYKVI 75
           ++ L A  A A + +    +  MS  +A   GK   +  ++AI +   ++ G P++    
Sbjct: 13  AIALAAGAAQAQEKVKIGFITDMSSLYADVEGKNGALAIQMAIDDFGGKVNGMPIELLQA 72

Query: 76  DTEGNAGKAVRKVQEAIGQDGARFFQGCTLSSSALAVSKEIHKAGGVFMTP-VGADEITG 134
           D +  A  A  K +E I   G     G T S + LA++K   +   VF+    G+  +T 
Sbjct: 73  DHQNKADIAASKAREWIDTQGLTMLFGGTSSGTGLAMAKVAQEKKRVFIVNGAGSSALTN 132

Query: 135 KDCNASTFRWSVPTYGAIRETLVPMSRQLPQAKRWYTITPQYVFGDALLDNARKVFAELG 194
           + C+  T  ++  T    + T   +  +    K W+ +T  Y FG AL  +A KV  E G
Sbjct: 133 EQCSPYTVHYAYDTVALAKGTGSAVIAR--GDKSWFFLTADYAFGQALEADASKVVKEKG 190

Query: 195 VEHIGNSYHSLQEQEFSGYLTNAIAAKPDVLVLLNFGSQASNALRQAVNFGIKDRMKV-- 252
              +G+  H L   +FS +L  A  +K  VL L N G    NA++ A  FGI   MK+  
Sbjct: 191 GTVVGSVKHPLNTSDFSSFLLQAQNSKAQVLALANAGGDTQNAIKAAKEFGISKTMKMVG 250

Query: 253 LMVWSAGLDQFQELGSDVLEGVYLGAQY-WHQVD--TPLNKLLVAATRKAYGINPNYPLA 309
           L+V+   +     LG    EG+ L   + W+  D      K     T++     P    A
Sbjct: 251 LLVF---VTDVHSLGLKNTEGLLLTTSWDWNLDDKTRAFGKRFFEKTKRM----PTDIQA 303

Query: 310 ADYIGTKVMLEAIVKAGSLDGAAVSAALQGMRFQGPTGEELIRPGDHQVLKDYYLLRGKP 369
           ADY  T   L+A+  A S+D   V A ++         +  +R  D + + D YL++ K 
Sbjct: 304 ADYSATMTYLKAVQAAKSIDADTVMAQIKKTPIDDFYAKGFVRE-DGRFVHDMYLVQVKS 362

Query: 370 QGQMRDEDDLAEVISSGRS---FVEVDHTGCAL 399
             + +   D  +V+   +    F     + CAL
Sbjct: 363 PAESKQPWDYYKVVQKLKGEEVFTTKAESKCAL 395