Pairwise Alignments

Query, 400 a.a., Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

Subject, 393 a.a., Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1) from Variovorax sp. SCN45

 Score = 85.9 bits (211), Expect = 2e-21
 Identities = 80/345 (23%), Positives = 145/345 (42%), Gaps = 16/345 (4%)

Query: 41  SGAFASYGKYADMGSRLAIAEHPQLLGHPL--KYKVIDTEGNAG---KAVRKVQEAIGQD 95
           +G FA  G + + G+  A+ E     G  L  KY+++ T+ +AG    A+      + Q 
Sbjct: 34  TGPFAVSGAFVNDGAAFAV-EQLNAQGGALGRKYELV-TQNHAGTPASAIAAATRLVEQQ 91

Query: 96  GARFFQGCTLSSSALAVSKEIHKAGGVFMTPVGA-DEITGKDCNASTFRWSVPTYGAIRE 154
           G  FF G   S ++LA++ ++     +F+    A D++TGK+C A+ FR      G    
Sbjct: 92  GVSFFTGLNPSGTSLAIASKMPGLNALFIDATAASDDLTGKNCGANYFR-----VGITDG 146

Query: 155 TLVPMSRQLPQA---KRWYTITPQYVFGDALLDNARKVFAELGVEHIGNSYHSLQEQEFS 211
            +V   R+  +A   K W  +      G            E G +     +  +   +  
Sbjct: 147 MMVNSFREQTKASGIKNWDLLMADIAVGHDTAKRFAAAMQESGGKVNKTLFAPITASDLG 206

Query: 212 GYLTNAIAAKPDVLVLLNFGSQASNALRQAVNFGIKDRMKVLMVWSAGLDQFQELGSDVL 271
            Y+   +    D L++    S     ++Q   F + ++ K ++  S   +       D  
Sbjct: 207 SYIAQLLDKPADGLLMYYPSSGGIALVKQQQAFKLFEKYKTVLSASMVNEILIGAHGDAS 266

Query: 272 EGVYLGAQYWHQVDTPLNKLLVAATRKAYGINPNYPLAADYIGTKVMLEAIVKAGSLDGA 331
            G++    Y+  +    N   V A    Y   P Y  A  Y+  +++ +AI+KA S D  
Sbjct: 267 VGLWSAQSYFWSMPGDRNAAFVKAFEARYKRKPTYIDADAYMSFELVHQAILKAKSADVP 326

Query: 332 AVSAALQGMRFQGPTGEELIRPGDHQVLKDYYLLRGKPQGQMRDE 376
           AV AAL G++     G+  +R  DHQ+L+   +++     + + E
Sbjct: 327 AVRAALSGLKASTVVGDVEMRAADHQLLRPLVVVQAAKASEGKGE 371