Pairwise Alignments

Query, 400 a.a., Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

Subject, 390 a.a., Benzoate ABC transporter, substrate-binding protein from Variovorax sp. SCN45

 Score = 77.8 bits (190), Expect = 5e-19
 Identities = 85/367 (23%), Positives = 149/367 (40%), Gaps = 12/367 (3%)

Query: 5   TLLKAGLALGALGSLPLGAHRAFADQPLTFYGLK-SMSGAFASYGKYADMGSRLAIAEHP 63
           T+  A LAL A+    L +            GL    SG + + G   + G +L + E  
Sbjct: 2   TIRTARLALTAIAFAALASAAGAQGTGKLKVGLMLPYSGTYTALGVAIENGFKLYVDEQG 61

Query: 64  -QLLGHPLKYKVIDTEGNAGKAVRKVQEAIGQDGARFFQGCTLSSSALAVSKEIHKAGGV 122
            +L G  ++Y  +D E +  KA   V + I +D      G   S  A+A++K   ++G V
Sbjct: 62  GKLAGREIEYFKVDDESDPAKATDNVNKLIKRDNVDVIVGTVHSGVAMAMAKAAKESGTV 121

Query: 123 FMTP-VGADEITGKDCNASTFRWSVPTYGAIRETLVPMSRQLPQAKRWYTITPQYVFGDA 181
            + P  GAD +TG  C  + FR S   +          ++Q  + K+  TIT +Y  GD 
Sbjct: 122 LIVPNAGADAVTGPMCAPNIFRSSFSNWQPAYAMGEVAAKQQGK-KKAMTITWKYAAGDE 180

Query: 182 LLDNARKVFAELGVEHIGNSYHSLQEQEFSGYLTNAIAAKPDVLVLLNFGSQASNALRQA 241
            ++  ++ F + G +            EF   LT   AAKPD +     G  A   ++  
Sbjct: 181 SVNGFKEGFEKNGGKVDKQLTLPFPNVEFQALLTEIAAAKPDAVYAFFAGGGAVKFVKDY 240

Query: 242 VNFGIKDRMKVLMVWSAGL--DQFQELGSDVLEGVYLGAQYWHQVDTPLNKLLVAATRKA 299
              G+    K + ++  G   D   +   +  +G+     Y   ++TP +     A  K+
Sbjct: 241 QAAGLN---KTIPLYGPGFLTDGTLDAQGESAQGMLTTLHYADGLNTPRDNAFRTAYAKS 297

Query: 300 YGINPNYPLAADYIGTKVMLEAI--VKAGSLDGAAVSAALQGMRFQGPTGEELIRPGDHQ 357
           + + P+      Y   +++   +   K      A  +AA++  +   P G   +    H 
Sbjct: 298 FKLQPDVYAVQGYDAAQMLGVGLNATKGDISKKAEFAAAVEKAKIDSPRGAFTVSK-SHN 356

Query: 358 VLKDYYL 364
            ++D YL
Sbjct: 357 PVQDIYL 363