Pairwise Alignments

Query, 400 a.a., Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

Subject, 421 a.a., putative Urea ABC transporter, periplasmic protein from Pseudomonas putida KT2440

 Score = 71.2 bits (173), Expect = 5e-17
 Identities = 87/365 (23%), Positives = 146/365 (40%), Gaps = 22/365 (6%)

Query: 1   MQRRTLLKAGLALGALGSLPLGAHRAFADQPLTFYGLKSMSGAFA-SYGKYADMGSRLA- 58
           M+RR+L+KA     ++ ++ L +    A + +    L S+SG  A S     DM      
Sbjct: 1   MKRRSLIKALTLSASIAAMGL-SWSIQAAETIKVGILHSLSGTMAISETSLKDMALMTIE 59

Query: 59  -IAEHPQLLGHPLKYKVIDTEGNAGKAVRKVQEAIGQDGARFFQGCTLSSSALAVSKEIH 117
            I     + G  L+  V+D   N      K ++ + QD      GC  S S  +V     
Sbjct: 60  QINAKGGVNGKMLEPVVVDPASNWPLFAEKSRQLLTQDKVAVVFGCWTSVSRKSVLPVFE 119

Query: 118 KAGGVFMTPVGADEITGKDCNASTF-RWSVPTYGAIRETLVPMSRQLPQAKRWYTITPQY 176
           +  G+   PV   +  G++ + + F   + P   AI      MS     AKR++ +   Y
Sbjct: 120 ELNGLLFYPV---QYEGEEMSPNVFYTGAAPNQQAIPAVEYLMSEDGGSAKRFFLLGTDY 176

Query: 177 VFGDALLDNAR-----KVFAELGVEHIGNSYHSLQEQEFSGYLTNAIAAKPDVLVLLNFG 231
           V+        R     K  A+  +E +   +     Q     +    A     ++    G
Sbjct: 177 VYPRTTNKILRAFLHSKGVADKDIEEVYTPFGHADYQTIVASIKKFSAGGKTAVISTVNG 236

Query: 232 SQASNALRQAVNFGIKDRMKVLMVWSAGLDQFQELGSDVLEGVYLGAQYWHQVDTPLNKL 291
                  ++  N G+K     ++ +S G ++ + + +  L G      Y+  VD P+N+ 
Sbjct: 237 DSNVPFYKELANQGLKATDVPVVAFSVGEEELRGIDTKPLVGHLAAWNYFESVDNPVNQK 296

Query: 292 LVA---ATRKAYGIN------PNYPLAADYIGTKVMLEAIVKAGSLDGAAVSAALQGMRF 342
            VA   A  KA G+        N P+ A Y+G  +  +A+ KA S D   V  AL G  F
Sbjct: 297 FVADWKAYAKAKGLPGADKAVTNDPMEATYVGIHMWAQAVEKAKSTDVDKVREALAGQSF 356

Query: 343 QGPTG 347
           + P+G
Sbjct: 357 EAPSG 361