Pairwise Alignments

Query, 400 a.a., Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

Subject, 404 a.a., ABC transporter permease from Magnetospirillum magneticum AMB-1

 Score = 76.3 bits (186), Expect = 2e-18
 Identities = 88/380 (23%), Positives = 154/380 (40%), Gaps = 10/380 (2%)

Query: 11  LALGALG-SLPLG-AHRAFADQPLTFYGLKSMSGAFASY-GKYADMGSRLAIAEHP-QLL 66
           L LGA   +L  G AH  ++D  +    L  +SG ++   GK   + +++AI +   +L 
Sbjct: 6   LLLGAAALALSTGMAHAQYSDGKVKIGVLTDLSGTYSDLAGKGTIVAAQMAIDDFGGKLN 65

Query: 67  GHPLKYKVIDTEGNAGKAVRKVQEAIGQDGARFFQGCTLSSSALAVSKEIHKAGGVFMTP 126
           G P++    D +  A  A    ++    +          +++A+AV +E+ K  G     
Sbjct: 66  GQPIELISADHQNKADIASGIARKWYDTEQVDAIAELVTTAAAIAV-REVSKEKGKIDLV 124

Query: 127 VGADE--ITGKDCNASTFRWSVPTYGAIRETLVPMSRQLPQAKRWYTITPQYVFGDALLD 184
            GA    +T   C+A+ F W+  TY     T   + +     K W+ +T  Y FG  L  
Sbjct: 125 SGAASTPLTNDKCSATGFHWTYDTYALANGTGDAVVKN--GGKTWFFLTADYAFGHNLQA 182

Query: 185 NARKVFAELGVEHIGNSYHSLQEQEFSGYLTNAIAAKPDVLVLLNFGSQASNALRQAVNF 244
              KV    G    G+  H     +FS +L  A ++   ++ L N G+   NA++QA  F
Sbjct: 183 QTEKVVKANGGTVKGSVKHPFPNSDFSSFLLQAQSSGAQIIGLANAGADTINAIKQAKEF 242

Query: 245 GIKDRMKVLMVWSAGLDQFQELGSDVLEGVYLGAQ-YWHQVDTPLNKLLVAATRKAYGIN 303
           GI    + L      +     LG +  +G+ L    YW   D         + +   G  
Sbjct: 243 GITQAGQSLAGLLVFITDVHSLGLENAQGMMLTTGFYWDMDDQTRAWSKRWSEKMGGGKM 302

Query: 304 PNYPLAADYIGTKVMLEAIVKAGSLDGAAVSAALQGMRFQGPTGEELIRPGDHQVLKDYY 363
           P+   A  Y      L A   A + +G  V+  ++ +       +      D +++ D Y
Sbjct: 303 PSMVHAGTYSQVLHYLRAAAAAKTDEGIKVADEMRKLPINDFFAKNGKIRADGRMVHDMY 362

Query: 364 LLRGKPQGQMRDEDDLAEVI 383
           L + K   + +   D  ++I
Sbjct: 363 LAQVKKPSESKGPWDYYKII 382