Pairwise Alignments

Query, 400 a.a., Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

Subject, 409 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score = 89.0 bits (219), Expect = 2e-22
 Identities = 95/407 (23%), Positives = 165/407 (40%), Gaps = 27/407 (6%)

Query: 9   AGLALGALGSLPLGAHRAFADQPLTFYG-LKSMSGAFASYGKYADM-GSRLAIAEHP-QL 65
           A L +G + + P  A +      +   G L   SG +A  G    +  +R+A  E   ++
Sbjct: 12  AALTIGVMSTGPAMAQQGKLSGDMVKIGVLNDRSGLYADLGGEGSVIAARMAAEEFGNKI 71

Query: 66  LGHPLKYKVIDTEGNAGKAVRKVQEAIGQDGARFFQGCTLSSSALAVSKEIHKAGGVF-M 124
           LG P++    D +          ++ I QDG         S  ALAV +   +   +F M
Sbjct: 72  LGKPIEIISADHQNKPDIGANLARQWIDQDGVDVIVDVPNSGVALAVQEVTKEKKKIFLM 131

Query: 125 TPVGADEITGKDCNASTFRWSVPTYGAIRETLVPMSRQLPQAKRWYTITPQYVFGDALLD 184
                  +TG  C+ + F W   T+     T   M ++      W+ IT  Y FG  L  
Sbjct: 132 EGPATSRLTGDACSPTGFHWPYDTHALAVGTGQAMVKE--GGDSWFFITADYAFGHQLEA 189

Query: 185 NARKVFAELGVEHIGNSYHSLQEQEFSGYLTNAIAAKPDVLVLLNFGSQASNALRQAVNF 244
           +      + G + +G+    L   +FS +L  A A+   ++ L N G     +++QA  F
Sbjct: 190 DTSVEVKKAGGKVVGSVKAPLNSADFSSFLLQAQASGAKIVGLANAGGDTITSIKQASEF 249

Query: 245 GI----KDRMKVLMVWSAGLDQFQELGSDVLEGVYLGAQ-YWHQVDTPLNKLLVAATRKA 299
           G+    + ++  L+++   L     LG  V + + L    YW + D   ++         
Sbjct: 250 GLTQGGQQKLAGLLIF---LSDVHALGLQVAQDLVLTTGFYWDRDDE--SRAWSKKFFDR 304

Query: 300 YGINPNYPLAADYIGTKVMLEAIVKAGSLDGAAVSAALQGMRFQGPTGEELIRPG----D 355
           +G  P    A  Y   +  L+AI  AG+ DG  V+A ++ M    P  +   + G    +
Sbjct: 305 HGKMPTMVQAGSYSAVRHYLKAIEAAGTDDGPTVAAKMKEM----PVNDMFAKNGTILPN 360

Query: 356 HQVLKDYYLLRGKPQGQMR---DEDDLAEVISSGRSFVEVDHTGCAL 399
            +++ D YL R K   + +   D   +   I    +F   + +GC L
Sbjct: 361 GRMVHDMYLARVKKPSESKGAWDYYQILRTIPGKEAFASFEESGCKL 407