Pairwise Alignments

Query, 286 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 552 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  149 bits (377), Expect = 1e-40
 Identities = 97/290 (33%), Positives = 151/290 (52%), Gaps = 18/290 (6%)

Query: 12  GLGLGMIYFLIAVGLTIIFGLLNFVNFAHGAFFLLGAYLCYTAVAVTG---------NFW 62
           GL LG +  L A+GL I FG++  +N AHG   +LGAY  +    +           +  
Sbjct: 263 GLSLGSVLLLAAIGLAITFGVMGVINMAHGEMVMLGAYTTFVVQELIRQKAPYLFDWSLT 322

Query: 63  LALLIAPLVVAALAWAVERLLIKRIYHLPHTFQILVTLGIALIIQEASVLIWGPVGKNIA 122
           +AL +A L  A +   +ER +I+ +Y  P    +L T G++LI+Q+A   ++GP  + + 
Sbjct: 323 IALPLAFLFTALVGILIERTVIRFLYGRPLE-TLLATWGVSLILQQAVRSVFGPTNQEVG 381

Query: 123 VPPELRGVLILGDFIYPYYRLFLIGFAALIGIGLWLLLERTRFGALVRAGSESTETVSLL 182
            P  + G   +G     Y RL++I FA ++   L L+L RT  G  VRA +++    + +
Sbjct: 382 APSWMSGAFQIGQLSITYNRLWIICFALIVFFTLLLVLRRTPLGLYVRAVTQNRRMAAAM 441

Query: 183 GTNIFRLFSLTFALGVGLAGVAGVLFAPLRGAQPFVGPEILGIAFVVVVIGGMGSFGGAL 242
           G    R+ +LTF LG G+AG+AGV  + +    P +G   +  +F+VVV GG+G+  G L
Sbjct: 442 GIRTGRIDALTFGLGSGIAGIAGVALSQIDNVSPNLGQGYIIDSFMVVVFGGVGNLWGTL 501

Query: 243 VGGLLVGVVQSMMTSLWPQGASLMIYGAMAAVILV---RPYGLF---GRA 286
           VG   +GV   ++      GA L     +  +IL    RP GLF   GRA
Sbjct: 502 VGAFTLGVANKLLEPF--AGAVLGKILLLVFIILFIQKRPRGLFALKGRA 549