Pairwise Alignments

Query, 286 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 283 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

 Score =  200 bits (508), Expect = 3e-56
 Identities = 114/278 (41%), Positives = 163/278 (58%), Gaps = 7/278 (2%)

Query: 10  LNGLGLGMIYFLIAVGLTIIFGLLNFVNFAHGAFFLLGAYLCYTAVAVTGNFWLALLIAP 69
           LN    G I FL+AVG ++IFGL+   N AHGA F+LG Y+  +A+ +   F  A+L A 
Sbjct: 8   LNSFAFGAILFLLAVGFSLIFGLMRVANLAHGALFMLGGYIATSAMGL--GFAGAVLAAG 65

Query: 70  LVVAALAWAVERLLIKRIYHLPHTFQILVTLGIALIIQEASVLIWGPVGKNIAVP-PE-L 127
              A     +ER LI+R+       Q+L TLG+A II +  +L+W   G  IA P PE L
Sbjct: 66  AACAVFGGILERTLIRRLAGR-ELAQVLGTLGLAFIIADQCLLVWS--GDPIAQPAPEAL 122

Query: 128 RGVLILGDFIYPYYRLFLIGFAALIGIGLWLLLERTRFGALVRAGSESTETVSLLGTNIF 187
           RG +  G  ++P YRL L+  A +  +G+W L+ERT  GA +RA  +  E    +G  + 
Sbjct: 123 RGAVGFGGIVFPAYRLALVALALVAFVGIWALVERTTLGARIRAAVDDREMARAMGIPVS 182

Query: 188 RLFSLTFALGVGLAGVAGVLFAPLRGAQPFVGPEILGIAFVVVVIGGMGSFGGALVGGLL 247
           RLF+  F LG GLAG+ G L AP+    P +  E+L +A +VV++GG+GS  GAL G L+
Sbjct: 183 RLFTTVFCLGAGLAGIGGALAAPIMSVYPGLDSEMLPLALLVVILGGIGSLTGALAGSLV 242

Query: 248 VGVVQSMMTSLWPQGASLMIYGAMAAVILVRPYGLFGR 285
           +G+V +    L P  A ++++  M  V+ VRP G FGR
Sbjct: 243 IGLVYTFGQMLLPDLAYVILFLPMVVVLAVRPQGFFGR 280