Pairwise Alignments

Query, 286 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 290 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

 Score =  151 bits (381), Expect = 2e-41
 Identities = 89/287 (31%), Positives = 157/287 (54%), Gaps = 7/287 (2%)

Query: 2   LDLYLFQLLNGLGLGMIYFLIAVGLTIIFGLLNFVNFAHGAFFLLGAYLCYTAVAVTGNF 61
           +++ +  +LNG+ LG +Y +I+VGLT+IFG++  VNFAHG F ++G Y  Y   A  G  
Sbjct: 1   MEVLIQLVLNGILLGSMYAIISVGLTLIFGIVRVVNFAHGEFLMVGMYAAYLLAAKFGLH 60

Query: 62  WLALLIAPLVVA--ALAWAVERLLIKRIYHLPHTFQILVTLGIALIIQEASVLIWGPVGK 119
             A  + P+V+   A+  AV+R LI+ +       QI  T+G++  +   ++L++G    
Sbjct: 61  PYAAAV-PIVILLFAIGAAVQRFLIQPLLGAEEHIQIFATVGLSTALVNLALLVFG--AD 117

Query: 120 NIAVPPEL-RGVLILGDFIYPYYRLFLIGFAALIGIGLWLLLERTRFGALVRAGSESTET 178
             ++PP   +G +++G F     +L +   A  +  GL L ++ T  G  +RA +++   
Sbjct: 118 LYSIPPSAAQGTVMVGGFSLVKGQLVMFVCALALVAGLHLFMQSTALGRAIRATAQNRTA 177

Query: 179 VSLLGTNIFRLFSLTFALGVGLAGVAGVLFAPLRGAQPFVGPEILGIAFVVVVIGGMGSF 238
             L+G  + +++ + F +G    G+A  L  PL    P +G   +  AFVVVV+GGM S 
Sbjct: 178 ALLMGVKVDQIYVIAFGIGAACVGLASALVMPLYPVTPTIGTYFVLTAFVVVVLGGMRSM 237

Query: 239 GGALVGGLLVGVVQSMM-TSLWPQGASLMIYGAMAAVILVRPYGLFG 284
            GA  G +++G+V S+    + P    ++ +    A+++ +P GLFG
Sbjct: 238 YGAFFGAMIIGLVDSLSGYYIAPDLKEVVYFAIFLAILIFKPTGLFG 284