Pairwise Alignments

Query, 286 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 327 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

 Score =  224 bits (572), Expect = 1e-63
 Identities = 126/300 (42%), Positives = 179/300 (59%), Gaps = 18/300 (6%)

Query: 2   LDLYLFQLLNGLGLGMIYFLIAVGLTIIFGLLNFVNFAHGAFFLLGAYLCYTAVAVTGNF 61
           L L+L Q+LNGL LG++ FL+A GLT++FG+++ +N AHG  ++LGAYL  TA A+TG+F
Sbjct: 24  LTLFLVQMLNGLQLGILLFLVAAGLTLVFGVMDVINLAHGVQYMLGAYLMVTATALTGSF 83

Query: 62  WLALLIAPLVVAALAWAVERLLIKRIYHLPHTFQILVTLGIALIIQEASVLIWGPVGKNI 121
           WL L +A      L   +ERL+I+++Y   H  Q+L T GI L + EA  ++WG     I
Sbjct: 84  WLGLPLALAAALVLGLLLERLVIRQLYGRDHLDQVLATFGIILFVSEAVRMVWGSAPLAI 143

Query: 122 AVPPELRGVLILGDFI-YPYYRLFLIGFAALIGIGLWLLLERTRFGALVRAGSESTETVS 180
            +P  L G + L D + YP YRL LIG    +   L++L+ RTR G L+RAG+ +   VS
Sbjct: 144 PMPQALSGSVRLMDGLNYPVYRLVLIGAGLGVAGLLYVLVTRTRAGMLLRAGATNAPMVS 203

Query: 181 LLGTNIFRLFSLTFALGVGLAGVAGVLFAPLRGAQPFVGPEILGIAFVVVVIGGMGSFGG 240
            LG +I  LF+  FA G  LA  AG +  P+   +P +G  +L +AFVV+VIGG+GS  G
Sbjct: 204 ALGVDITALFARIFAFGAMLAAFAGAMAGPILSVEPGMGDNLLILAFVVIVIGGIGSMRG 263

Query: 241 ALVGGLLVGVVQ-----------------SMMTSLWPQGASLMIYGAMAAVILVRPYGLF 283
           A V  LLVG++                  S  ++  P  AS+ +Y  MAA++  RP GLF
Sbjct: 264 AFVAALLVGLIDTLGRSFLTDILKLVMSASAASAAGPALASMSVYVLMAAILFFRPRGLF 323