Pairwise Alignments

Query, 286 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 304 a.a., branched-chain amino acid transporter permease subunit LivH from Pseudomonas simiae WCS417

 Score =  150 bits (380), Expect = 3e-41
 Identities = 92/297 (30%), Positives = 156/297 (52%), Gaps = 17/297 (5%)

Query: 4   LYLFQLLNGLGLGMIYFLIAVGLTIIFGLLNFVNFAHGAFFLLGAYLCYTAVAVTGNFWL 63
           ++L QL+NGL LG +Y LIA+G T+++G++  +NFAHG  +++ AYL   ++A+   F +
Sbjct: 4   IFLQQLVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAYFGI 63

Query: 64  ---------ALLIAPLVVAALAWAVERLLIKRIYHLPHTFQILVTLGIALIIQEASVLIW 114
                     L+   +V     W +ER+  K + +      ++  +GI+LI+Q  + +  
Sbjct: 64  ESFPLLILGTLIFTVVVTGVYGWVIERVAYKPLRNSTRLAPLISAIGISLILQNYAQIAQ 123

Query: 115 GPVGKNIAVPPELRG---VLILGDFIYPYYRLFLIGFAALIGIG-LWLLLERTRFGALVR 170
           G   K   +P  L G   V I   F+   Y    I  AA  G+  L  +++ T+ G + R
Sbjct: 124 G--AKQQGIPTLLAGAWRVDIGSGFVQLTYTKVFILVAAFAGMALLTYVIKYTKLGRMCR 181

Query: 171 AGSESTETVSLLGTNIFRLFSLTFALGVGLAGVAGVLFAPLRGAQPFVGPEILGI-AFVV 229
           A  +  +  S+LG N  R+ S  F +G  +A +AGVL     G   F    I+GI AF  
Sbjct: 182 ATQQDRKMASILGINTDRVISYVFVIGAAMAALAGVLITLNYGTFDFYAGFIIGIKAFTA 241

Query: 230 VVIGGMGSFGGALVGGLLVGVVQSMMTSLWPQG-ASLMIYGAMAAVILVRPYGLFGR 285
            V+GG+GS  GA++GG+++G+ +S+ + L       +  +  +  +++ RP GL GR
Sbjct: 242 AVLGGIGSLPGAMLGGIILGISESLFSGLINSDYKDVFSFSLLVVILIFRPQGLLGR 298