Pairwise Alignments

Query, 286 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 309 a.a., Branched-chain amino acid ABC transporter, permease protein LivH (TC 3.A.1.4.1) from Variovorax sp. SCN45

 Score =  141 bits (356), Expect = 2e-38
 Identities = 86/303 (28%), Positives = 162/303 (53%), Gaps = 21/303 (6%)

Query: 2   LDLYLFQLLNGLGLGMIYFLIAVGLTIIFGLLNFVNFAHGAFFLLGAYLCYTAVAVTGN- 60
           +D+ L Q++NGL LG +Y LIA+G T+++G++N +NFAHG   ++GA   +T + +  + 
Sbjct: 1   MDILLQQIINGLVLGSMYALIALGYTMVYGIINLINFAHGEVLMVGALTSWTIIGLMKDG 60

Query: 61  -----FWL----ALLIAPLVVAALAWAVERLLIKRIYHLPHTFQILVTLGIALIIQEASV 111
                 WL    AL+IA +V A L + +E++  + + + P    ++  +G+++++Q  ++
Sbjct: 61  MPNTPGWLILLIALVIACIVAATLNFVIEKVAYRPLRNSPKLAPLITAIGMSILLQTLAM 120

Query: 112 LIWGPVGKNIAVPPELRGVLILGDFIYPYYRLFLIGFAALIGIGLWLLLERTRFGALVRA 171
           +IW P  K          + + G  I P   + L   A  + + +W L+  T+ G  +RA
Sbjct: 121 IIWKPTNKAYPNLLPTDPIHVAGAVISPTQVMILSVTAFSLVVLMW-LVNYTKLGRAMRA 179

Query: 172 GSESTETVSLLGTNIFRLFSLTFALGVGLAGVAGVLFAPLRGAQPFVGPEILGI-AFVVV 230
            +E+    +L+G     + S TF +G  LA +AGV++A   G        + G+ AF   
Sbjct: 180 TAENPRVAALMGIRPDMVISATFIIGAVLAAIAGVMYASNYGIAQHAMGFLPGLKAFTAA 239

Query: 231 VIGGMGSFGGALVGGLLVGVVQSMMTS---------LWPQGASLMIYGAMAAVILVRPYG 281
           V GG+G+  GA+VGG+L+G+++++ +          L    + +  +  +  ++ +RP G
Sbjct: 240 VFGGIGNLAGAVVGGILLGLIEAIGSGYIGTITGGVLGSNYSDIFAFIVLIVMLTLRPSG 299

Query: 282 LFG 284
           L G
Sbjct: 300 LLG 302