Pairwise Alignments

Query, 286 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 326 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score =  181 bits (460), Expect = 1e-50
 Identities = 106/287 (36%), Positives = 165/287 (57%), Gaps = 17/287 (5%)

Query: 12  GLGLGMIYFLIAVGLTIIFGLLNFVNFAHGAFFLLGAYLCYTAVAVTGNF---------- 61
           GL +GMI F+IA GLT++FGL++ +NF HG F  LGA++  + + + G++          
Sbjct: 37  GLAMGMIIFIIASGLTLVFGLMDVLNFGHGVFIALGAFVASSVLGLMGDWTGSGELWRNL 96

Query: 62  ---WLALLIAPLVVAALAWAVERLLIKRIYHLPHTFQILVTLGIALIIQEASVLIWGPVG 118
              + A+L+A  V  A+  A ER +++ +Y   H  QIL+T+G  +I +E   +IWGP  
Sbjct: 97  VAVFPAMLVAMAVAGAVGLAFERFIVRPVYG-QHLKQILITMGGMIIGEELIKVIWGPAQ 155

Query: 119 KNIAVPPELRGVLILGDFIYPYYRLFLIGFAALI-GIGLWLLLERTRFGALVRAGSESTE 177
             + +P  LRG L++GD     YRL  +    ++ G+  W L  RT+ G L+RAG +  E
Sbjct: 156 IPLPLPEALRGSLLVGDAAISKYRLLAVAVGVVVFGVLAWTL-GRTKIGLLIRAGVQDRE 214

Query: 178 TVSLLGTNIFRLFSLTFALGVGLAGVAGVLFAPL-RGAQPFVGPEILGIAFVVVVIGGMG 236
            V  LG  I RLF   F +G  LAG+ GV++    +   P +G ++  + F+V++IGG+G
Sbjct: 215 MVESLGYRIGRLFVGVFVVGSALAGLGGVMWGLFQQNLVPQMGAQVNVLIFIVIIIGGLG 274

Query: 237 SFGGALVGGLLVGVVQSMMTSLWPQGASLMIYGAMAAVILVRPYGLF 283
           S GGAL+G LLVG++ + +  L P          M AV+L RP G++
Sbjct: 275 STGGALIGALLVGLMTNYIGFLLPTLTQFASIFLMVAVLLWRPQGVY 321