Pairwise Alignments

Query, 286 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 290 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score =  176 bits (445), Expect = 7e-49
 Identities = 104/282 (36%), Positives = 157/282 (55%), Gaps = 5/282 (1%)

Query: 9   LLNGLGLGMIYFLIAVGLTIIFGLLNFVNFAHGAFFLLGAYLCYTAVAVTGNFWLALLIA 68
           L +G+  GM+ F++AVGL +  GL+NF+N AHGAF + G YL   A+   G  +LA L  
Sbjct: 5   LFDGIAYGMLLFVLAVGLAVTLGLMNFINLAHGAFAMAGGYLTVFAMQKLGLPFLACLPL 64

Query: 69  PLVVAALAWAV-ERLLIKRIYHLPHTFQILVTLGIALIIQEASVLIWGPVGKNIAVPPEL 127
             +V ALA A+ ER L + +Y  PH  Q+L ++G+A +   A     G   +N+ +P  L
Sbjct: 65  AFIVVALAGALLERTLYRPMYGKPHLDQVLFSIGLAFMAVAAIDYFVGSSQQNVQLPEWL 124

Query: 128 RGVLILGDFIYP----YYRLFLIGFAALIGIGLWLLLERTRFGALVRAGSESTETVSLLG 183
           RG   +GD  +     +YRLF+IG  A++ + L L+L +TRFG+ +RA  +     + LG
Sbjct: 125 RGRTEIGDGAFMLGMGHYRLFIIGVCAVLTVVLQLILSKTRFGSRLRAAVDDPRVAAGLG 184

Query: 184 TNIFRLFSLTFALGVGLAGVAGVLFAPLRGAQPFVGPEILGIAFVVVVIGGMGSFGGALV 243
            N+  +F LTFA+G GLAG+ G L A + G  P    + +    +VV +GG  S  G L 
Sbjct: 185 INVNIVFLLTFAVGSGLAGLGGALGAEILGLDPTFPLKYMIYFLIVVSVGGTSSITGPLA 244

Query: 244 GGLLVGVVQSMMTSLWPQGASLMIYGAMAAVILVRPYGLFGR 285
             LL+G+         P+  +  +Y  M  +++ RP GLF R
Sbjct: 245 AALLLGIADVAGKYFIPKMGAFTVYLLMILILMWRPQGLFTR 286