Pairwise Alignments

Query, 286 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 290 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score =  160 bits (406), Expect = 2e-44
 Identities = 99/285 (34%), Positives = 162/285 (56%), Gaps = 3/285 (1%)

Query: 2   LDLYLFQLLNGLGLGMIYFLIAVGLTIIFGLLNFVNFAHGAFFLLGAYLCYTAVAVTG-N 60
           +++ L  +LNGL  G +Y LIAVGLT+I+G+L+ +NFAHGA  +L  Y  Y      G +
Sbjct: 4   INILLPSVLNGLTTGAVYALIAVGLTLIYGVLHIINFAHGASLMLALYAVYFLKERWGID 63

Query: 61  FWLALLIAPLVVAALAWAVERLLIKRIYHLPHTFQILVTLGIALIIQEASVLIWGPVGKN 120
            ++AL IA + + AL +A++R++I R  H      +L TLGIA++++  ++L++    ++
Sbjct: 64  PYMALPIAIVGMFALGYALQRIVINRAGHGKDENILLATLGIAIVMENLALLLFKSDTRS 123

Query: 121 IAVPPELRGVLILGDFIYPYYRLFLIGFAALIGIGLWLLLERTRFGALVRAGSESTETVS 180
           I     L  V I G  +    +L     A ++   L+ ++ RT  G  +RA ++  E   
Sbjct: 124 IDTAYSLSTVAI-GPAMIAVPKLVAFAGALVVSGVLFWIMGRTDLGRAIRAVAKEKEGAK 182

Query: 181 LLGTNIFRLFSLTFALGVGLAGVAGVLFAPLRGAQPFVGPEILGIAFVVVVIGGMGSFGG 240
           L+G ++  +++++F +G+   G A     P     P VG   + +AF +VV+GGMGSF G
Sbjct: 183 LMGIDVDHVYAMSFGIGLACLGAAACFLLPAYYVNPQVGGGFVLVAFTIVVLGGMGSFVG 242

Query: 241 ALVGGLLVGVVQSM-MTSLWPQGASLMIYGAMAAVILVRPYGLFG 284
           AL+GG LVGVV+S+    L      + I+     V+L RP G+FG
Sbjct: 243 ALIGGFLVGVVESLGGLYLGESLGQIGIFAIFIGVVLFRPQGMFG 287