Pairwise Alignments

Query, 286 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 308 a.a., high-affinity branched-chain amino acid ABC transporter permease LivH from Dickeya dianthicola ME23

 Score =  149 bits (376), Expect = 8e-41
 Identities = 88/299 (29%), Positives = 163/299 (54%), Gaps = 22/299 (7%)

Query: 5   YLFQLLNGLGLGMIYFLIAVGLTIIFGLLNFVNFAHGAFFLLGAYLCYTAVAVTGNF--- 61
           +L Q+ NG+ LG  Y LIA+G T+++G++  +NFAHG  +++G+Y+ +  +A        
Sbjct: 8   FLQQMFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMMMGID 67

Query: 62  --WL----ALLIAPLVVAALAWAVERLLIKRIYHLPHTFQILVTLGIALIIQEASVLIWG 115
             WL    A + A ++ +A  W++ER+  K + +      ++  +G+++ +Q    L  G
Sbjct: 68  AGWLLIGAAFIAAVVISSAYGWSIERVAYKPVRNSKRLIALISAIGMSIFLQNYVSLTQG 127

Query: 116 PVGKNIAVPPELRGVLILGD-------FIYPYYRLFLIGFAALIGIGLWLLLERTRFGAL 168
              +++A+P  + G  +LG+              ++++ F A+  + L L +  +R G  
Sbjct: 128 --SRDVALPSLIHGQWVLGESNGFAATLSSMQLTIWIVTFLAM--LALTLFIRYSRMGRA 183

Query: 169 VRAGSESTETVSLLGTNIFRLFSLTFALGVGLAGVAGVLFAPLRGA-QPFVGPEILGIAF 227
            RA +E  +  SLLG +  R+ SLTF +G  +A VAGVL     G   P++G      AF
Sbjct: 184 CRACAEDLKMASLLGISTDRVISLTFVIGAVMAAVAGVLLGQFYGVINPYIGFMAGMKAF 243

Query: 228 VVVVIGGMGSFGGALVGGLLVGVVQSMMTS-LWPQGASLMIYGAMAAVILVRPYGLFGR 285
              V+GG+GS  GA++GGL++G+ +++ ++ L  +   ++ +  +  V+LV P G+ GR
Sbjct: 244 TAAVLGGIGSIPGAMIGGLVLGIAEALTSAYLSTEYKDVVSFALLIVVLLVMPTGILGR 302