Pairwise Alignments

Query, 286 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 301 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Azospirillum sp. SherDot2

 Score =  157 bits (398), Expect = 2e-43
 Identities = 93/300 (31%), Positives = 164/300 (54%), Gaps = 21/300 (7%)

Query: 2   LDLYLFQLLNGLGLGMIYFLIAVGLTIIFGLLNFVNFAHGAFFLLGAY---LCYTAVAVT 58
           ++ +L QL+NGL LG IY LIA+G T+++G++  +NFAHG  +++G++   + + A+   
Sbjct: 1   MEYFLQQLINGLSLGAIYGLIAIGYTMVYGIIGMINFAHGEIYMIGSFVALITFLAIGAL 60

Query: 59  GNFWLALLIAPLVVAAL------AWAVERLLIKRIYHLPHTFQILVTLGIALIIQEASVL 112
           G  W+ L +  +++A++       W VER+  + +   P    ++  +G+++ +Q    +
Sbjct: 61  GITWVPLALLIMLLASMLFTSVYGWTVERIAYRPLRSSPRLAPLISAIGMSIFLQNYIQI 120

Query: 113 IWGPVGKNIAVPPELRGVLIL--GDFIYPYYRLFLIGFAALIGIGLWLLLERTRFGALVR 170
           + G   K   + P L G L L  G     Y RL  I    ++ +G  +L+ RT  G   R
Sbjct: 121 LQGARSK--PLQPILPGNLTLMDGAVSVSYVRLATIVITLVLMVGFTMLINRTSLGRAQR 178

Query: 171 AGSESTETVSLLGTNIFRLFSLTFALGVGLAGVAGVLFAPLRGAQPFVGPEILGI-AFVV 229
           A  +  +   LLG N+ R+ SLTF +G  LA VAG++   + G   F    + G+ +F  
Sbjct: 179 ACEQDKKMAGLLGVNVDRVISLTFVMGAALAAVAGMMVLLIYGVIDFYIGFLAGVKSFTA 238

Query: 230 VVIGGMGSFGGALVGGLLVGVVQSMMT----SLWPQGASLMIYGAMAAVILVRPYGLFGR 285
            V+GG+GS  GA++GG+++G++++  +    S W   A+  I   +  V++ RP GL GR
Sbjct: 239 AVLGGVGSLPGAMLGGVVIGLIEAFWSGYVGSEWKDVATFSI---LVLVLIFRPTGLLGR 295