Pairwise Alignments

Query, 339 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 329 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  209 bits (533), Expect = 6e-59
 Identities = 125/321 (38%), Positives = 180/321 (56%), Gaps = 8/321 (2%)

Query: 8   PVAKGRAPALLSLVVASLVALPLLLPSATLAT---EILIFAMAALACNLLLGYTGLLSFG 64
           P   G     + L   + VA+ L+ P         +++ FA+ A A NLLLGYTGLLSFG
Sbjct: 11  PATSGAGSNAMILFAVAAVAVLLVAPFGVYPVFLMKVMCFALFACAFNLLLGYTGLLSFG 70

Query: 65  QGIFFGVGAYGAALLMIHLQWGMFAALLGAAVFGAFLALLVGALAIRRTGIYFVMLTLAF 124
             +FFG  AY  A     L +    ALL    F A L LL G LAIRR GIYF M+TLA 
Sbjct: 71  HAMFFGGSAYICAHTTKVLGFTPELALLAGVAFSAALGLLAGLLAIRRQGIYFAMVTLAL 130

Query: 125 SQMAYFLAYTLSGWTGGDNGLLDVPRPNIEIAGHVLVDLADPRHFYVFVAVLFLLIFAAA 184
           +QM +F       +TGG++GL  VPR  +      ++D++   H Y FV  +FL  F   
Sbjct: 131 AQMFFFFCLQAK-FTGGEDGLQAVPRRPL----FGVIDISQDIHLYYFVLAIFLFGFFVI 185

Query: 185 LRVIRSPFGSTLLAIRENETRAAAIGYDTRHFKILVFMLSGAITGIAGALYAMLLHFAPL 244
            R I SPFG  L AIRENE RA ++GY    +K+L F+LS A+ G+AG+   ++   A L
Sbjct: 186 YRTIHSPFGQVLKAIRENEPRAISLGYRANQYKLLAFVLSAALAGLAGSTKVLVFQLASL 245

Query: 245 SNIDLMMSENILIMTIVGGTGSLFGSLLGAGAIVLLGDVLSELWPRWLMLLGVILILVVV 304
           +++   MS  +++MT+VGG G++ G ++GA  IV + + L+ L    L++ GVI +L V 
Sbjct: 246 TDVAWQMSGEVVLMTLVGGMGTVLGPVVGAAVIVTMQNYLAGLGEWVLVIQGVIFVLAVS 305

Query: 305 FMRGGLWGGLTELGKRLLATR 325
             R G  G +  + +++ A +
Sbjct: 306 LFRRGFVGEVIAVWQQMKARK 326