Pairwise Alignments

Query, 339 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 335 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  254 bits (650), Expect = 2e-72
 Identities = 130/305 (42%), Positives = 187/305 (61%)

Query: 20  LVVASLVALPLLLPSATLATEILIFAMAALACNLLLGYTGLLSFGQGIFFGVGAYGAALL 79
           L +A L  LP +LPS  LA  +LI+ +  +  NLL GYTGLLSFG   FFG GAY   + 
Sbjct: 31  LTIAVLAVLPFVLPSQALAVNVLIYGLFTVGFNLLFGYTGLLSFGHAAFFGTGAYLTGMA 90

Query: 80  MIHLQWGMFAALLGAAVFGAFLALLVGALAIRRTGIYFVMLTLAFSQMAYFLAYTLSGWT 139
           + HL +G F A+L   V  + L+ ++GAL+IR  GIYF M+TLA +Q+ Y++A   SGWT
Sbjct: 91  IAHLGFGWFPAMLTGIVGASLLSAVIGALSIRTRGIYFCMVTLALAQLVYYVALQASGWT 150

Query: 140 GGDNGLLDVPRPNIEIAGHVLVDLADPRHFYVFVAVLFLLIFAAALRVIRSPFGSTLLAI 199
           GG+NGL        ++ G   V+L +P   Y F+     L      RV+ SPFG+ + A+
Sbjct: 151 GGENGLRGFTVAKADLIGGFSVNLLNPLAKYYFIMFFAALALWFVSRVLNSPFGAAIEAV 210

Query: 200 RENETRAAAIGYDTRHFKILVFMLSGAITGIAGALYAMLLHFAPLSNIDLMMSENILIMT 259
           RENETRA A G+D    K+L F+LSGA+ G+AG L A+ L   PL  + +  S  +++MT
Sbjct: 211 RENETRARACGFDVERTKLLSFILSGALCGLAGTLSALHLSIVPLDALSVHTSSIVVMMT 270

Query: 260 IVGGTGSLFGSLLGAGAIVLLGDVLSELWPRWLMLLGVILILVVVFMRGGLWGGLTELGK 319
           ++GG GS FG  +GA   +L+ DV S     W +++G++ IL V+F+  G+WG L +L +
Sbjct: 271 MLGGAGSFFGPFVGALVFLLIEDVASLWTTHWQLIVGIVFILFVLFLPKGIWGSLIQLTR 330

Query: 320 RLLAT 324
           R  A+
Sbjct: 331 RRRAS 335