Pairwise Alignments

Query, 339 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 322 a.a., Phenylacetate ABC transporter, permease protein 2 from Variovorax sp. SCN45

 Score =  147 bits (372), Expect = 3e-40
 Identities = 100/328 (30%), Positives = 164/328 (50%), Gaps = 21/328 (6%)

Query: 9   VAKGRAPALLSLVVASLVALPLLLPS---ATLATEILIFAMAALACNLLLGYTGLLSFGQ 65
           VA+ R  A L L+ A +V LP +  +     +   + I+++AA+  NL++GY G +S G 
Sbjct: 6   VARPRPLASLLLLAAVIVLLPFVFTANFHLRVIVLVWIYSLAAIGLNLMMGYGGQVSLGH 65

Query: 66  GIFFGVGAYGAALLMIHLQWGMFAA--LLGAAVFGAFLALLVGALAIRRTGIYFVMLTLA 123
           G F  +GAY  A+     +WG+  A  L G  +  A LA +VG   +R  G Y  + TL 
Sbjct: 66  GAFLAIGAYAVAVGSS--RWGLSPAVTLPGGVLVSAALAFVVGRPILRLKGHYLAVGTLG 123

Query: 124 FSQMAYFLAYTLSGWTGGDNGLLDVPRPNI--EIAGHVLVDLADPRHFYVFVAVLFLLIF 181
           F  + +        W+GG +G+  V R     ++ G++         +Y     L ++  
Sbjct: 124 FGVLVFMALTNQVAWSGGPDGMQVVRRALFGWDMRGNIF--------WYALTGSLLMIGA 175

Query: 182 AAALRVIRSPFGSTLLAIRENETRAAAIGYDTRHFKILVFMLSGAITGIAGALYAMLLHF 241
             AL +  SP G  L A+R++E  ++++G D    K+ VF+LS     +AG+L A+    
Sbjct: 176 WIALNLANSPTGLALRALRDSEIASSSLGVDIARQKLFVFVLSACYASVAGSLIALFNGH 235

Query: 242 APLSNIDLMMSENILIMTIVGGTGSLFGSLLGAGAIVLLGDVLSELWPRWLMLLGVILIL 301
                 D M+S  ++ M ++GG GS+ GS++GA  +VLL  VLS L       +G +++ 
Sbjct: 236 VTPGLSDFMVSVQLVTMVVLGGMGSVLGSVVGAALLVLLPQVLSSLHDYEQAFIGFVMVA 295

Query: 302 VVVFMRGGLWGGLTELGKRLLATRNADD 329
             +F+R G+   L     R L +RN  D
Sbjct: 296 SAIFLRAGIVPSLA----RALQSRNRHD 319