Pairwise Alignments

Query, 339 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 405 a.a., Urea ABC transporter, permease protein UrtC from Variovorax sp. SCN45

 Score =  122 bits (306), Expect = 2e-32
 Identities = 99/353 (28%), Positives = 150/353 (42%), Gaps = 48/353 (13%)

Query: 4   KNPLPVAKGRAPALLSLVVASLVA------LPLLLP------SATLATEILIFAMAALAC 51
           K PL   KG     ++L+V   VA      +P+  P      +  L  +I+ +A+ ALA 
Sbjct: 9   KGPLLSGKGWTAFFVALIVVCAVAPALNMWVPVDSPLHMSDYAVALVGKIMCYAICALAM 68

Query: 52  NLLLGYTGLLSFGQGIFFGVGAYGAAL------------------LMIHLQW-------- 85
           +L+ GYTG+LS G G+FF +G Y   +                   M+ L W        
Sbjct: 69  DLIWGYTGILSLGHGLFFALGGYMMGMYLMRQIGRDGNYKSDLPDFMVFLDWKTLPWHWT 128

Query: 86  ---GMFAALLGAAVFGAFLALLVGALAIRRT--GIYFVMLTLAFSQMAYFLAYTLSGWTG 140
                 A L+        +A + G  A R    G+YF ++T A +  A  L +      G
Sbjct: 129 FSDSFIATLILIVAVPGLIAFVFGFFAFRSRIKGVYFSIITQAMTFAAMLLFFRNETGFG 188

Query: 141 GDNGLLDVPRPNIEIAGHVLVDLADPRHFYVFVAVLFLLIFAAALRVIRSPFGSTLLAIR 200
           G+NG  D  R    I G  +         +       L  F  A  +I S FG  L AIR
Sbjct: 189 GNNGFTDFKR----ILGIPIATQEMRMTLFALTGATLLGFFLFAKWLIGSKFGRVLQAIR 244

Query: 201 ENETRAAAIGYDTRHFKILVFMLSGAITGIAGALYAMLLHFAPLSNIDLMMSENILIMTI 260
           + ETR    GY+   +K+ ++++S  + G+AGALY   +       +    S  I I   
Sbjct: 245 DAETRVMFSGYNPLPYKLTIWVISAVMCGVAGALYVPQVGIINPGEMSAANSIEIAIWAA 304

Query: 261 VGGTGSLFGSLLGAGAIVLLGDVLSELWPR-WLMLLGVILILVVVFMRGGLWG 312
           VGG  +L G ++GA  +      L+  +P  WL  LG + I V +F+  G+ G
Sbjct: 305 VGGRATLIGPIIGAFIVNGAKSWLTVAYPEYWLYFLGALFIAVTLFLPNGIVG 357