Pairwise Alignments

Query, 339 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 327 a.a., Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) from Variovorax sp. SCN45

 Score =  137 bits (344), Expect = 5e-37
 Identities = 82/270 (30%), Positives = 140/270 (51%), Gaps = 6/270 (2%)

Query: 41  ILIFAMAALACNLLLGYTGLLSFGQGIFFGVGAYGAALLMIHLQWGMFAALLGAAVFGAF 100
           +++F++ AL  +L++G TG  +     FFG+G Y A L+    Q   F ++L  A+  A 
Sbjct: 41  LMVFSVLALGMHLVIGETGQFALSHAAFFGIGIYTAGLINNQWQPPFFVSILAGALLSAA 100

Query: 101 LALLVGALAIRRTGIYFVMLTLAFSQMAYFLAYTLSGWTGGDNGLLDVPRPNIEIAGHVL 160
           L  ++G LA+R   IY  + T AF +   ++       T G NGL   P     + G+ L
Sbjct: 101 LGWVIGLLALRMRDIYLALATFAFGEAMQWVFLNWESVTNGSNGLQMKPA---SLGGYQL 157

Query: 161 VDLADPRHFYVFVAVLFLLIFAAALRVIRSPFGSTLLAIRENETRAAAIGYDTRHFKILV 220
           ++      F + +A L L +    + + RS  GS+  A+RE++  A A+G +TR  K+  
Sbjct: 158 MNDLQAYPFVIAIAALMLWL---TVTLSRSRLGSSFRAVRESDVAAVAMGVNTRTVKVTA 214

Query: 221 FMLSGAITGIAGALYAMLLHFAPLSNIDLMMSENILIMTIVGGTGSLFGSLLGAGAIVLL 280
           F+LS A  G+AG +Y +   F    ++    +  IL M +VGG GS+ G++ GA    L 
Sbjct: 215 FVLSAAFAGVAGGMYTLFTSFIHPESLGFQTTILILTMVVVGGLGSVRGAVAGAIVFGLA 274

Query: 281 GDVLSELWPRWLMLLGVILILVVVFMRGGL 310
            ++L +      ++ G IL+L ++F+  G+
Sbjct: 275 SELLRQAPSYQEIIYGGILMLFMMFLPKGM 304