Pairwise Alignments

Query, 339 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 329 a.a., ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score =  168 bits (425), Expect = 2e-46
 Identities = 107/302 (35%), Positives = 165/302 (54%), Gaps = 17/302 (5%)

Query: 18  LSLVVASLVALPLLLPSATL------ATEILIFAMAALACNLLLGYTGLLSFGQGIFFGV 71
           L L++  L A PL+ P   L         +LI A+AA + N +LG+ G+++ G   F G+
Sbjct: 11  LGLLLVLLAAFPLIAPLFGLEFYIGFVRRVLIVALAAASLNFILGFGGMVALGHAGFIGM 70

Query: 72  GAYGAALLM---IHLQWGMFAALLGAAVFGAFLALLVGALAIRRTGIYFVMLTLAFSQMA 128
           GAY    L    +   W M+ A   AA+    +A L+G +A+R  G+YF+M TLAF+QM 
Sbjct: 71  GAYTVVALSDAGVMSGWIMWPA---AALVAGLVAALIGTVALRTRGVYFIMTTLAFAQML 127

Query: 129 YFLAYTLSGWTGGDNGLLDVPRPNIEIAGHVLVDLADPRHFYVFVAVLFLLIFAAALRVI 188
           YF+  +L  + GGD+G   + RP + + G   +DL +  +FY  V  +  L      R  
Sbjct: 128 YFVVVSLRRY-GGDDGYTLMSRPTL-LPG---LDLGNESNFYWVVLAIVALALWWLHRAT 182

Query: 189 RSPFGSTLLAIRENETRAAAIGYDTRHFKILVFMLSGAITGIAGALYAMLLHFAPLSNID 248
           RS FG  L+ IR+NETR  A+GY     +++ F ++GAI G+AGAL A    F   + + 
Sbjct: 183 RSRFGHALMGIRDNETRMRALGYPVFRLQLVAFAIAGAIAGLAGALLAGGNGFVSPATMH 242

Query: 249 LMMSENILIMTIVGGTGSLFGSLLGAGAIVLLGDVLSELWPRWLMLLGVILILVVVFMRG 308
              S  +L+M ++GG G  +G  +GA   ++L +VL +    W M LG++LI V ++   
Sbjct: 243 WTQSATLLVMVVIGGLGRSWGGPVGAVVWLVLEEVLKQHTEHWHMPLGLLLIAVALWAPK 302

Query: 309 GL 310
           GL
Sbjct: 303 GL 304