Pairwise Alignments

Query, 339 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 330 a.a., Broad-specificity amino acid ABC transporter, permease protein 2 from Variovorax sp. SCN45

 Score =  200 bits (509), Expect = 4e-56
 Identities = 121/312 (38%), Positives = 177/312 (56%), Gaps = 25/312 (8%)

Query: 19  SLVVASLVALPLLLPSATLATEILIFAMAALACNLLLGYTGLLSFGQGIFFGVGAYGAAL 78
           +L++ +LV  P          +++ FA+ A A NLLLG+TGLLSFG   F G  AY A  
Sbjct: 12  ALLLLALVLAPFFGAYPVFVMKLMCFALFAAAFNLLLGFTGLLSFGHAAFLGGSAYVAGH 71

Query: 79  LMIHLQWGMFA--ALLGAAVFGAFLALLVGALAIRRTGIYFVMLTLAFSQMAYFLAYTLS 136
            M    WG+     L+   + GAFL  + G LAIRR GIYF M+TLA +QM +F+A    
Sbjct: 72  AM--KVWGLTPELGLIAGTLTGAFLGWVFGVLAIRRQGIYFAMITLALAQMMFFVALQAK 129

Query: 137 GWTGGDNGLLDVPRPNIEIAGHVLVDLADPRHFYVFVAVLFLLIFAAALRVIRSPFGSTL 196
            +TGG++GL  VPR  +      L+DL+     Y    V+ +  F   +R I SPFG  L
Sbjct: 130 -FTGGEDGLQGVPRGKL----FGLIDLSSDLTMYYVALVIVVAAFLLIVRTIHSPFGQVL 184

Query: 197 LAIRENETRAAAIGYDTRHFKILVFMLSGAITGIAGALYAMLLHFAPLSNIDLMMSENIL 256
             I+ENE RA ++GYD   FK+L F++S A++G+AG+L  ++L FA LS++    S  ++
Sbjct: 185 KGIKENEPRALSLGYDVSRFKLLAFVISAALSGLAGSLKTLVLGFATLSDVHWTASGQVI 244

Query: 257 IMTIVGGTGSLFGSLLGAGAIVLLGDVLSEL-----------WPRWL-----MLLGVILI 300
           +MT+VGG G+L G L+G+  +VLL + + EL           W   L     M+ G+I +
Sbjct: 245 LMTLVGGLGTLSGPLVGSAVVVLLENKIGELGSFLARITTIDWFNTLGESVTMVTGLIFV 304

Query: 301 LVVVFMRGGLWG 312
           + V+  R G+ G
Sbjct: 305 ICVLAFRKGIMG 316