Pairwise Alignments

Query, 339 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 600 a.a., ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score =  144 bits (363), Expect = 6e-39
 Identities = 89/276 (32%), Positives = 137/276 (49%), Gaps = 6/276 (2%)

Query: 37  LATEILIFAMAALACNLLLGYTGLLSFGQGIFFGVGAYGAALLMIHLQWGMFAALLGAAV 96
           +AT+  +  + A+  NLL GY G +S G G    VG+Y  ALLMI   W  + A L    
Sbjct: 46  MATQAGVMMLVAIGLNLLTGYAGQVSLGHGALVAVGSYTTALLMIDAHWSFWLAALAGMA 105

Query: 97  FGAFLALLVGALAIRRTGIYFVMLTLAFSQMAYFLAYTLSGWTGGDNGLLDVPRPNIEIA 156
                 L++   A+R +  YF ++TL F+Q+   L       T G +GL+ +P P   I 
Sbjct: 106 VSTLAGLVMALPALRLSTWYFALVTLTFAQVVTDLLVEWRSLTRGFSGLVGIPPP--AIG 163

Query: 157 GHVLVDLADPRHFYVFVAVLFLLIFAAALRVIRSPFGSTLLAIRENETRAAAIGYDTRHF 216
            HVL     P   Y+ VA   +L F     + RS +G  ++A R+N   A A G      
Sbjct: 164 AHVL----GPVEVYLAVAACVVLAFLGVRNLSRSRYGRGMVAARDNPLAATASGVSLLRI 219

Query: 217 KILVFMLSGAITGIAGALYAMLLHFAPLSNIDLMMSENILIMTIVGGTGSLFGSLLGAGA 276
           K+  F +S A+ G+AGA YA+        +     S   L++ +VGG G L+G ++G   
Sbjct: 220 KLFAFAVSAALAGLAGAFYAVQKTVITPEDFTADFSIFFLLIIVVGGLGRLWGPVVGTLV 279

Query: 277 IVLLGDVLSELWPRWLMLLGVILILVVVFMRGGLWG 312
             LL ++L  L    L++ GV+L++++VF   G+ G
Sbjct: 280 FFLLPELLGPLQSWRLLIYGVVLLVLMVFAPHGIMG 315