Pairwise Alignments

Query, 339 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 351 a.a., Urea ABC transporter, permease protein UrtC from Variovorax sp. SCN45

 Score =  145 bits (367), Expect = 1e-39
 Identities = 115/349 (32%), Positives = 171/349 (48%), Gaps = 45/349 (12%)

Query: 18  LSLVVASLVALPLLLPSA------TLATEILIFAMAALACNLLLGYTGLLSFGQGIFFGV 71
           L+ + A L+ L ++LP+        L ++ L FA  A+   L  GY G+LS GQG+FFG+
Sbjct: 13  LAGMAAVLLLLAVVLPATLDPFRLNLVSKYLAFAFVAVGVVLTWGYGGVLSLGQGMFFGL 72

Query: 72  GAYGAALLM--------------------IHLQWGMFAAL----LGAAVFGAFLALLVGA 107
           G Y  A+ +                    +   W  F +L    +G  V  A LA +   
Sbjct: 73  GGYMMAMFLKLEASAPELPDFMVWSSVDQLPSWWIPFHSLGWTIVGILVVPAVLAYVFSY 132

Query: 108 LAIRR--TGIYFVMLTLAFSQMAYFLAYTLSGWTGGDNGLLDVPRP-NIEIAGHVLVDLA 164
              +R  +G+YF ++TL+ +     +     G TGG NG+ D      ++IAG       
Sbjct: 133 AIFKRRVSGVYFAIVTLSLALTLTVVVIGQQGDTGGANGITDFRTLLGLDIAGD------ 186

Query: 165 DPRHFYVFVAVLFL-LIFAAALRVIRSPFGSTLLAIRENETRAAAIGYDTRHFKILVFML 223
           D +    FV VL + L+ A +L ++RS FG  L+AIR+ E R    GY+T H K  VF +
Sbjct: 187 DAKRTMYFVEVLAIALVMAVSLVIVRSRFGKILIAIRDREDRVRFSGYNTAHMKAFVFAV 246

Query: 224 SGAITGIAGALYAMLLHFAPLSNIDLMMSENILIMTIVGGTGSLFGSLLGAGAIVLLGDV 283
           +  ++ I GA Y++ +       I ++ S  ++I   VGG  S+ G+++GA  I  L   
Sbjct: 247 AAVLSSIGGAFYSLQVGLIAPGVIGVVASVEMVIYAAVGGRLSIPGAVIGALLIGFLKSY 306

Query: 284 LSELWPR-WLMLLGVILILVVVFMRGGLWGGLTELGKRLLATRNADDKP 331
           LSE +P  WL  LG + ILVV  M  GL G    LG RLL  R A+  P
Sbjct: 307 LSETFPEGWLYFLGAVFILVVWAMPDGLAG----LGARLLRRRGAEAVP 351