Pairwise Alignments

Query, 339 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 316 a.a., Benzoate ABC transporter, permease protein 2 from Variovorax sp. SCN45

 Score =  150 bits (378), Expect = 5e-41
 Identities = 110/294 (37%), Positives = 164/294 (55%), Gaps = 26/294 (8%)

Query: 40  EILIFAMAALACNLLLGYTGLLSFGQGIFFGVGAYGAALLMIHLQWGMFAALLGAAVFGA 99
           +I+I ++ AL+  LL+G TGL+S G   F+G+GAY   +L    + G FA LL  A+  A
Sbjct: 33  KIMILSIFALSLELLVGMTGLVSLGHAAFYGIGAY-VTVLASGSEGGNFALLLPLAMGAA 91

Query: 100 FL-ALLVGALAIRRTGIYFVMLTLAFSQMAYFLAY-TLSGWTGGDNGLLDVPRPNIEIAG 157
            L AL VGAL++R  G+YF+M+TLAF+QMA+F+ + T  G  GG +G+    RP +    
Sbjct: 92  ALYALFVGALSLRTRGVYFIMVTLAFAQMAFFVFHDTKVG--GGSDGIYMYVRPALG--- 146

Query: 158 HVLVDLADPRHFYVFVAVLFLLIFAAALRVI--RSPFGSTLLAIRENETRAAAIGYDTRH 215
              +DL +     +F  VL  L+F   L  +  RS FG+ L  IR NE R  A G+    
Sbjct: 147 --ALDLEN--RTVLFYVVLASLVFTYGLLALIRRSRFGAALAGIRVNEQRMRAAGFSVYG 202

Query: 216 FKILVFMLSGAITGIAGALYAMLLHFAPLSNIDLMMSEN---ILIMTIVGGTGSLFGSLL 272
           +K+  F+L+GA+ G+AG L A       + N +LM   N   +L+M I+GG G L G+++
Sbjct: 203 YKLAAFVLAGALAGLAGFLLASR---DGVVNPELMAWHNSGEVLLMVILGGLGHLRGAVI 259

Query: 273 GAGAIVLLGDVLS------ELWPRWLMLLGVILILVVVFMRGGLWGGLTELGKR 320
           GA A  LL ++ S       L   W + LG+ +I+ V  +  GL G +  L  +
Sbjct: 260 GAIAFTLLKEIFSTHAVMGPLADHWQLTLGLTIIVFVALLPKGLIGLVQRLSPK 313