Pairwise Alignments

Query, 339 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 640 a.a., ABC transporter permease from Variovorax sp. OAS795

 Score =  164 bits (414), Expect = 8e-45
 Identities = 111/340 (32%), Positives = 174/340 (51%), Gaps = 13/340 (3%)

Query: 3   EKNPLPVAKGRAPALLSLVVASLVALPLLLPSATLAT----EILIFAMAALACNLLLGYT 58
           ++ PL  A      L++ +  +L+A+PL    +   T    ++LI A+ A + + ++G  
Sbjct: 310 QEEPLRRASKGYLWLVAALGLALMAMPLFTADSPYTTVLMIDLLIAALFAASLHFIMGPA 369

Query: 59  GLLSFGQGIFFGVGAYGAALLMIHLQWGMFAALLGAAVFGAFLALLVGALAIRRTGIYFV 118
           G+ SFG   +FG+GAYGAALL+      M  AL+ A +  A  A + G  A+R +G+Y  
Sbjct: 370 GMHSFGHAAYFGLGAYGAALLVRASGMPMELALIVAPLVAAIGAFVYGWFAVRLSGVYLA 429

Query: 119 MLTLAFSQMAYFLAYTLSGWTGGDNGLLDVPRPNIEIAGHVLVDLADPRHFYVFVAVLFL 178
           MLTLAF+Q+ + + Y    +TGG NGL  V              L+D R +Y    VL  
Sbjct: 430 MLTLAFAQITWAVVYQWDSFTGGSNGLTGVWPSEW---------LSDKRTYYWLTLVLVA 480

Query: 179 LIFAAALRVIRSPFGSTLLAIRENETRAAAIGYDTRHFKILVFMLSGAITGIAGALYAML 238
                  RV+ SPFG  L A R++  RA AIG D +  +   F+++GA  G+AG+LYA  
Sbjct: 481 AGILMLRRVLFSPFGYALRAGRDSVLRADAIGIDVKRMQWTAFVIAGAAAGLAGSLYAFS 540

Query: 239 LHFAPLSNIDLMMSENILIMTIVGGTGSLFGSLLGAGAIVLLGDVLSELWPRWLMLLGVI 298
                  ++ +  S + L+M ++GG  +L G ++GA     L D ++     W   LG I
Sbjct: 541 KGSISPESLSVDKSVDGLVMVLLGGIQTLAGPVVGAVTFSWLHDTVARNTDYWRATLGAI 600

Query: 299 LILVVVFMRGGLWGGLTELGKRLLATRNADDKPQAKTKET 338
           ++L+V+    G+ G   +L +RLL  R +      K K T
Sbjct: 601 ILLLVLLFPQGIAGFAKQLSERLLRGRRSQADVALKEKRT 640



 Score = 50.4 bits (119), Expect = 1e-10
 Identities = 62/254 (24%), Positives = 106/254 (41%), Gaps = 20/254 (7%)

Query: 30  LLLPSATLATEILIFAMAALACNLLLGYTGLLSFGQGIFFGVGAYGAALLMIHL-QWGMF 88
           LLL   T  +      +     +L+ G T +++F  G FF VG Y A  L+  L   G +
Sbjct: 6   LLLQFLTGLSSASSLFLVGAGLSLIFGVTRIVNFAHGSFFMVGIYLAYTLVDKLGTLGFW 65

Query: 89  AALLGAAVFGAFLALLVGALAIRRTGIY----FVMLTLAFSQMAYFLAYTLSGWTGGDNG 144
            A+L AA+    +  L+  + +RR  IY       L   F+ +       L  W  G + 
Sbjct: 66  PAVLIAALAVGVIGALIEMVLLRR--IYKSPELFQLLATFALVLVIKDAVLYVW--GPDE 121

Query: 145 LLDVPRP----NIEIAGHVLVDLADPRHFYVFVAVLFLLIFAAALRVIRSPFGSTLLAIR 200
           LL    P    ++EI G        P +    + V  +++    L + R+ +G+ + A  
Sbjct: 122 LLGPRAPGLSGSVEILGRQF-----PTYDLFLIVVGPVVLGLLWLLLTRTRWGTLVRAAT 176

Query: 201 ENETRAAAIGYDTRHFKILVFMLSGAITGIAGALYAMLLHFAPLSNIDLMMSENILIMTI 260
           ++    +A+G +       VF L   +  + GAL   L        +DL       ++ +
Sbjct: 177 QDREMVSALGVNQAWLFTAVFALGATLAALGGAL--QLPREPATLAMDLNTIGAAFVVVV 234

Query: 261 VGGTGSLFGSLLGA 274
           VGG GS+ G+ + A
Sbjct: 235 VGGMGSIPGAYVAA 248