Pairwise Alignments

Query, 339 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 335 a.a., branched chain amino acid ABC transporter permease from Agrobacterium fabrum C58

 Score =  154 bits (389), Expect = 3e-42
 Identities = 102/325 (31%), Positives = 166/325 (51%), Gaps = 12/325 (3%)

Query: 9   VAKGRAPAL-----LSLVVASLVALPLLLPSATLATEILIFAMAALACNLLLGYTGLLSF 63
           + K R+P       L ++ A+++   L   +  L T I+  A+  L+ +L+ GY G+ + 
Sbjct: 14  IPKARSPLRTLAGPLLIITAAIIGYFLFPDNLALLTRIIAIALLVLSIDLVTGYCGVATL 73

Query: 64  GQGIFFGVGAYGAALLMIHLQWG--MFAALLGAAVFGAFLALLVGALAIRRTGIYFVMLT 121
           G    FG GAY A +   H +    +   ++GAA  G    LL G + +R  G+  ++L+
Sbjct: 74  GHAALFGAGAYAAGIAAAHFEITDPLLMTVIGAAG-GGVAGLLSGTVLLRAHGLPQLVLS 132

Query: 122 LAFSQMAYFLAYTLSGWTGGDNGLLDVPRPNIEIAGHVLVDLADPRHFYVFVAVLFLLIF 181
           +A   + +  A   SGWTGG +GL  V      + G    DL   R  YV+   L LL+F
Sbjct: 133 IAVIHLFHEAANKASGWTGGSDGLSGVSPD--ALFGTFEFDLFG-RTAYVYGVCLLLLVF 189

Query: 182 AAALRVIRSPFGSTLLAIRENETRAAAIGYDTRHFKILVFMLSGAITGIAGALYAMLLHF 241
            A   V+ SPFG     ++++  R  A+G       + +F++SG + GI GAL A+    
Sbjct: 190 IALRVVVNSPFGMLCRGVKQDSIRIQAMGGSVNGTVLKMFVISGIVAGIGGALNAISTQV 249

Query: 242 APLSNIDLMMSENILIMTIVGGTGSLFGSLLGAGAIVLLGDVLSELWP-RWLMLLGVILI 300
             L ++   +S   L+M ++GG GSL+G+L+G    +   DV+S   P  WL ++G++LI
Sbjct: 250 VGLDSLSFTLSAEGLVMLVLGGAGSLYGALIGTVTFMWFEDVVSAANPFHWLTIVGLLLI 309

Query: 301 LVVVFMRGGLWGGLTELGKRLLATR 325
            VV+F   GL+G   ++  RL   R
Sbjct: 310 AVVLFAPRGLYGAGEQIIGRLRGDR 334