Pairwise Alignments

Query, 250 a.a., Branched-chain amino acid ABC transporter, ATP binding protein from Pseudomonas putida KT2440

Subject, 263 a.a., Lipopolysaccharide export system ATP-binding protein LptB from Xanthobacter sp. DMC5

 Score =  173 bits (439), Expect = 3e-48
 Identities = 105/251 (41%), Positives = 151/251 (60%), Gaps = 5/251 (1%)

Query: 5   LLETRHLELAYGPFKAVAGVDLKVRAGTIHTIIGPNGAGKTSLFHCLTGERQATAGKILF 64
           LLE   L   +    AV  +  +V+AG I  +IGPNGAGK++LF+ + G  + T G I F
Sbjct: 10  LLEVEGLTCRFAGVTAVDDLSFRVKAGEIKAVIGPNGAGKSTLFNMIAGVTRPTDGAIKF 69

Query: 65  NGQDIIRKPSHGRVALGMARSFQLTSLFQNLSVRENLRLAAQGR---DGLGALNFWRSV- 120
           +G  + R P+H R   G+AR+FQ   +F+ +SV EN+ +    R     L AL    SV 
Sbjct: 70  DGARVDRLPTHARARRGIARTFQNLQIFREMSVLENVMVGRHLRGRATTLSALLHIPSVG 129

Query: 121 EHKRSHWNTADQVLERLKLSARAETLAGELSHGQQRVLEVGMSICAKPTLLMLDEPTSGM 180
             +R+   TA  +LER  L+A+A   AG L+ GQ +VLE+  ++ ++P LL+LDEP +G+
Sbjct: 130 AEERAMEATAMALLERFGLAAKAGLPAGSLAFGQMKVLELARALASEPRLLLLDEPAAGL 189

Query: 181 GIDDIPVMTDLISDLGRD-HTVLLIEHNMSIVMSISQRITVMSHGQILVEGTPEQVRNDE 239
              +   M + I DL RD  TVLL+EHNM +VMS+S  I V+++G+ + EGT E VR   
Sbjct: 190 PHAEADKMAETIRDLNRDGMTVLLVEHNMRMVMSLSHDILVLNNGRRIAEGTAEDVRRHP 249

Query: 240 RVRTAYLGEAA 250
            V +AYLGE A
Sbjct: 250 EVLSAYLGEEA 260